Template-based Modeling Results for YGFZ_ECOLI


  Submitted Primary Sequence

>Length 326
MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANTLHIEPLPYSLEE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANTLHIEPLPYSLEE
CCCCCCCCCHHHHHHCCCCEEEECCCCEEEEEECCCHHHHHHHHHCCCHHHCCCCCEEEEEEECCCCCEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCHHHHHHHHCCCCCCCCCCEEECCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHCEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEHHHCCCCCEEEECCCCCEEEEECCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANTLHIEPLPYSLEE
44323212332001123300001011100000102202200100011202202332000000013412000000001123100000222112200210241112220201213210000010230310013012322233321122110000113111320000023200210022032303213220010001211112032211130002201131000011331011021000102232222200000102233113212102021134233001000001133220000000121133321010233221020120122269
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANTLHIEPLPYSLEE
1MUSTER3ttgA0.2030.9692.858threading_1-NLYFQGLVSDTRIAHKKFGLFYPVSRPSIFVEGEDRKNFLQGIASQDILKQDEKSLSYSFFLNPKARILFDAWCGNFEDKIALFPPAGTREEFVNHLKKYLFFTKAKITDSDHFREIRLVGPETISVLLSLFDNNFSGSSFRLKNGGYVLITSFQHNLQADLFIPIDQFETTQKSLEDGGVLLDESSYLAYLTEKGIPLFPSELNDSFFPAEAGLDSV-GVSYNKGCYVGQEPVTRLKFQGHLNRSLAGFRLEGPKEFP----VTLFNPKDGNEAGILTRTSSSDILGIGLGYIKRNFSENGTELLL-PDAQLVRVHSLPFV---
2SPARKS3ttga0.1990.9696.345threading_2-NLYFQGEVSDTRIAHKKFGLFYPSSRPSIFVEGEDRKNFLQGIASQDILKQDEKSLSYSFFLNPKARILFDAWCGNFEDKIALFPPAGTREEFVNHLKKYLFFRKAKITDSDHFREIRLVGPETISVLLSLFDNNFSGSSFRLKNGGLIHPTSFQHNLDADLFIPIDQFETTQKSLEDGGVLLDESSYLAYLTEKGIPLFPSELNDSFFPAEAGLDSVG-VSYNKGCYVGQEPVTRLKFQGHLNRSLAGFRLEGPKEFP----VTLFNPKDGNEAGILTRTSSSDILGIGLGYIKRNFSENGTELLL-PDAQLVRVHSLPFV---
3PROSPECT21wooA0.1550.9724.083threading_3MKRTPLSIFEEVMAVRKSVGMFDVSHMGEFLVKGPEAVSFIDFLITNDFSSLPDGKAIYSVMCNENGGIIDDLVVYKVSPDELMVVNAANIEKDFNWIKSHSKNFDVEVSNIDTTALIAFQGPKAQETLQELVEDGLEEIAKSIVAGVETLVSGYTGEDGFELMLEAKNAPKVWDALKIDGRPAGLGARDVCRLEATYLLYGQDMDENTNPFEVGLSWV--VKLNKD-FVGKEALLKAKE--KVERKLVALELSGKRIARKGYEVLK----NGERVGEITSGNFSPTGKSIALALVSKSVKIGDQLGVVFPGGEALVVKKPFSVRR
4PPA-I3ttgA0.1990.9693.868threading_4-NLYFQTEVSDTRIAHKKFGLFYPSSRPSIFVEGEDRKNFLQGIASQDILKQDEKSLSYSFFLNPKARILFDAWCGNFEDKIALFPPAGTREEFVNHLKKYLFRTKAKITDSDHFREIRLVGPETISVLLSLFDNNFSGSSFRLKNGGYVLITSFQHNLDADLFIPIDQFETTQKSLEDGGVLLDESSYLAYLTEKGIPLFPSELNDSFFPAEAGLDSV-GVSYNKGCYVGQEPVTRLKFQGHLNRSLAGFRLEGPKEFP----VTLFNPKDGNEAGILTRTSSSDILGIGLGYIKRNFSENGTELLL-PDAQLVRVHSLPFV---
5HHPRED-l1vly_A1.0000.9635.825threading_5--FTPFPPRQPTASARLPLTL-TLDDWALATITGADSEKY-QGQVTADVSQ-AEDQHLLAAHCDAKGK-WSNLRLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTDEATAN-LTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQE-VARAKFRGANKRALWLLAGSASRLPEAGEDLELK-GENWRRTGTVLAAVKLEDGQVVVQVV-NND-EPDSIFRVRDDANTLHIEPLPYSLE-
6HHPRED-g1pj5_A0.1230.9754.052threading_6RPYWFEAAAAEAWKTRTAVAMYDMTPLKRLEVSGPGALKLLQELTTADLAK-KPGAVTYTLLLDHAGGVRSDITVARLSEDFQLGANGNIDTAYFERAARHQTTDWVQVRDTTGTCCIGLWGPLARDLVSKVSDDDFTNLKVIGGIPVTAMRLSYVGELGWELYTSADNGQRLWDALWQGVIAAGRAAFSSLRLEKGYRSWGTDMTTEHDPFEAGLGFA--VKMAKESFIGKGALEGRTEEA-SARRLRCLTIDDRSIVLGKEPVFY----KEQAVGYVTSAAYGYTVAPIAYSYLPGTVSVGDSVDYFGRRITATVTEDPLYDPK
7SP33ttga0.1930.9696.539threading_7-NLYFQGEVSDTRIAHKKFGLFYPSSRPSIFVEGEDRKNFLQGIASQDILKQDEKSLSYSFFLNPKARILFDAWCGNFEDKIALFPPAGTREEFVNHLKKYLFFRKAKITDSDHFREIRLVGPETISVLLSLFDNNFSGSRLKNGGYVLIHPTSFQHNLDADLFIPIDQFETTQKSLEDGGVLLDESSYLAYLTEKGIPLFPSELNDSFFPAEAGLDSVG-VSYNKGCYVGQEPVTRLKFQGHLNRSLAGFRLEGPKEFP----VTLFNPKDGNEAGILTRTSSSDILGIGLGYIKRNFSENGTELLL-PDAQLVRVHSLPFV---
8SAM-T991nrkA0.9840.9665.753threading_8-AFTPFPPRQPTASARLPLTLT-LDDWALATITGADSEKY-QGQVTADVSQ-AEDQHLLAAHCDAKGK-WSNLRLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTDEATA-NLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQE-VARAKFRGANKRALWLLAGSASRLPEAGEDLEL-KGENWRRTGTVLAAVKLEDGQVVVQVVNND--EPDSIFRVRDDANTLHIEPLPYSLE-
9MUSTER1nrkA0.9040.9572.664threading_9FPFPP----RQPTASARLPLTLTLDDWALATITGADSEKY-QGQVTADVSQAE-DQHLLAAHCDAKGKWSNL-RLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTD-EATANLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQE-VARAKFRGANKRALWLLAGSASRLPEAGEDLEL-KGENWRRTGTVLAAVKLEDGQVVVQVV---NDEPDSIFRVRDDANTLHIEPLPYSLE-
10SPARKS3tfha0.1270.9696.160threading_10LPAAFGSIEDSYKHLKEHVQIWDVAAERQVEISGKDSAELVQLMTCRDLSKSKIGRCYYCPIIDENGNLVNDPVVLKLDENKWWISADSDVIFFAKGLASG---HKFDVKIVPVVDIMAIQGPKSFALMEKVFGKKITELKFFEGTKHLIARSGWSKQGGYEVYVETQSGQKLYDHLFEKEFNVGPGCPLIERIESALLSYGNDFDNNDNPFECGFDQYVSLD-SDINFLGKEKLKEIKLKG-PQKKLRGVKIDIKEISLTGSKNIY--DENNNVIGELRSACYSPHFQIGIAMIKKSHWEASQGFKIQINDINGNVCDLPFI---

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.804 to 1nrkA
TM-score=0.816 to native
SCOP code=b.44.2.1
TM-score=0.801 to 1nrkA
TM-score=0.814 to native
SCOP code=b.44.2.1
TM-score=0.807 to 1nrkA
TM-score=0.820 to native
SCOP code=b.44.2.1
TM-score=0.894 to 1wopA
TM-score=0.821 to native
SCOP code=b.44.2.1
TM-score=0.804 to 1nrkA
TM-score=0.817 to native
SCOP code=b.44.2.1

  Experimental Structure

Download 1nrkA
SCOP code=b.44.2.1