Template-based Modeling Results for YGID_ECOLI


  Submitted Primary Sequence

>Length 262
MSSTRMPALFLGHGSPMNVLEDNLYTRSWQKLGMTLPRPQAIVVVSAHWFTRGTGVTAMETPPTIHDFGGFPQALYDTHYPAPGSPALAQRLVELLAPIPVTLDKEAWGFDHGSWGVLIKMYPDADIPMVQLSIDSSKPAAWHFEMGRKLAALRDEGIMLVASGNVVHNLRTVKWHGDSSPYPWATSFNEYVKANLTWQGPVEQHPLVNYLDHEGGTLSNPTPEHYLPLLYVLGAWDGQEPITIPVEGIEMGSLSMLSVQIG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSSTRMPALFLGHGSPMNVLEDNLYTRSWQKLGMTLPRPQAIVVVSAHWFTRGTGVTAMETPPTIHDFGGFPQALYDTHYPAPGSPALAQRLVELLAPIPVTLDKEAWGFDHGSWGVLIKMYPDADIPMVQLSIDSSKPAAWHFEMGRKLAALRDEGIMLVASGNVVHNLRTVKWHGDSSPYPWATSFNEYVKANLTWQGPVEQHPLVNYLDHEGGTLSNPTPEHYLPLLYVLGAWDGQEPITIPVEGIEMGSLSMLSVQIG
CCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSSTRMPALFLGHGSPMNVLEDNLYTRSWQKLGMTLPRPQAIVVVSAHWFTRGTGVTAMETPPTIHDFGGFPQALYDTHYPAPGSPALAQRLVELLAPIPVTLDKEAWGFDHGSWGVLIKMYPDADIPMVQLSIDSSKPAAWHFEMGRKLAALRDEGIMLVASGNVVHNLRTVKWHGDSSPYPWATSFNEYVKANLTWQGPVEQHPLVNYLDHEGGTLSNPTPEHYLPLLYVLGAWDGQEPITIPVEGIEMGSLSMLSVQIG
5533310000001001110023220020024003203302000001010212110000132131011111013200102130310210032003002413020333211011000000000023220100000021231121002002101203421000000010110021021312221221011012002200222222112100202303101101102210000000000122433120002102000000100112
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSSTRMPALFLGHGSPMNVLEDNLYTRSWQKLGMTLPRPQAIVVVSAHWFTRGTGVTAMETPPTIHDFGGFPQALYDTHYPAPGSPALAQRLVELLAPIPVTLDKEAWGFDHGSWGVLIKMYPDADIPMVQLSIDSSKPAAWHFEMGRKLAALRDEGIMLVASGNVVHNLRTVKWHGDSSPYPWATSFNEYVKANLTWQGPVEQHPLVNYLDHEGGTLSNPTPEHYLPLLYVLGAWDGQEPITIPVEGIEMGSLSMLSVQIG
1MUSTER2pw6A0.9530.8932.744threading_1-----RPALFLGHGPNV--LEDNLYTRSWQKLGT-LPRPQAIVVVSAHWFTRGTGVTAET--------------LYDTHYPAPGSPALAQRLVELLAPIPVTLDKEAWGFDHGSWGVL-IKYPDADIP-VQLSIDSSKPAAWHFE-GRKLAALRDEGI-LVASGNVVHNLRTVKWHGDSSPYPWATSFNEYVKANLTWQGPVEQHPLVNYLDHEGGTLSNPTPEHYLPLLYVLGAWDGQEPITIPVEGI-EGSLSL-SVQIG
2SPARKS2pw6a0.9490.8935.229threading_2-----RPALFLGHGPNV--LEDNLYTRSWQKLG-TLPRPQAIVVVSAHWFTRGTGVT--------------AETLYDTHYPAPGSPALAQRLVELLAPIPVTLDKEAWGFDHGSWGVLI-KYPDADI-PVQLSIDSSKPAAWHF-EGRKLAALRDEGI-LVASGNVVHNLRTVKWHGDSSPYPWATSFNEYVKANLTWQGPVEQHPLVNYLDHEGGTLSNPTPEHYLPLLYVLGAWDGQEPITIPVEGI-EGSLSL-SVQIG
3PROSPECT22pw6A0.8720.8933.295threading_3-----RPALFLGHGPNV--LEDNLYTRSWQKLGT-LPRPQAIVVVSAHWFTRGTGVTAETLYDT--------------HYPAPGSPALAQRLVELLAPIPVTLDKEAWGFDHGSWGVLI-KYPDADIPVQ-LSIDSSKPAA-WHFEGRKLAALRDEGI-LVASGNVVHNLRTVKWHGDSSPYPWATSFNEYVKANLTWQGPVEQHPLVNYLDHEGGTLSNPTPEHYLPLLYVLGAWDGQEP-ITIPVEGIEGSLSLSVQ-IG
4PPA-I2pw6A0.9400.8933.700threading_4-----RPALFLGHGPNV--LEDNLYTRSWQKLGT-LPRPQAIVVVSAHWFTRGTGVTAETLYDT--------------HYPAPGSPALAQRLVELLAPIPVTLDKEAWGFDHGSWGVL-IKYPDADIP-VQLSIDSSKPAAWHFE-GRKLAALRDEGI-LVASGNVVHNLRTVKWHGDSSPYPWATSFNEYVKANLTWQGPVEQHPLVNYLDHEGGTLSNPTPEHYLPLLYVLGAWDGQEPITIPVEGI-EGSLSL-SVQIG
5HHPRED-l2pw6_A0.9870.87010.689threading_5------PALFLGHG---NVLEDNLYTRSWQKLG-TLPRPQAIVVVSAHWFTRGTGVTA----------------LYDTHYPAPGSPALAQRLVELLAPIPVTLDKEAWGFDHGSWGVLIK-YPDADIP-VQLSIDSSKPAAWHFE-GRKLAALRDEGI-LVASGNVVHNLRTVKWHGDSSPYPWATSFNEYVKANLTQGP-VEQHPLVNYLDHEGGTLSNPTPEHYLPLLYVLGAWDGQEPITIPVEGIE-GSLS-LSVQI-
6HHPRED-g2pw6_A0.9870.87410.105threading_6------PALFLGHG---NVLEDNLYTRSWQKLG-TLPRPQAIVVVSAHWFTRGTGVTA----------------LYDTHYPAPGSPALAQRLVELLAPIPVTLDKEAWGFDHGSWGVLIK-YPDADIP-VQLSIDSSKPAAWHFE-GRKLAALRDEGI-LVASGNVVHNLRTVKWHGDSSPYPWATSFNEYVKANLTQGP-VEQHPLVNYLDHEGGTLSNPTPEHYLPLLYVLGAWDGQEPITIPVEGIE-GSLS-LSVQIG
7SP32pw6a0.9400.8935.728threading_7-----RPALFLGHGPNV--LEDNLYTRSWQKLGT-LPRPQAIVVVSAHWFTRGTGVT--------------AETLYDTHYPAPGSPALAQRLVELLAPIPVTLDKEAWGFDHGSWGVLI-KYPDADI-PVQLSIDSSKPAAWHF-EGRKLAALRDEGI-LVASGNVVHNLRTVKWHGDSSPYPWATSFNEYVKANLTWQGPVEQHPLVNYLDHEGGTLSNPTPEHYLPLLYVLGAWDGQEPITIPVEGI-EGSLSLS-VQIG
8SAM-T992pw6A0.9180.8897.281threading_8-----RPALFLGHG---NVLEDNLYTRSWQKLG-TLPRPQAIVVVSAHWFTRGTGVTA--------------ETLYDTHYPAPGSPALAQRLVELLAPIPVTLDKEAWGFDHGSWGVLIK-YPDADIP-VQLSIDSSKPAAWHFE-GRKLAALRDEGIL-VASGNVVHNLRTVKWHGDSSPYPWATSFNEYVKANLTWQGPVEQHPLVNYLDHEGGTLSNPTPEHYLPLLYVLGA-WDGQEPITIPVEGIEGSLS-LSVQIG
9MUSTER1bouB0.1440.9271.524threading_9--ARVTTGITSSH-IPAAAIQTGPVFKGYQPIRDWINMPDVVILVYNHASAPTFAIGCAETFK-PADEGWGPRPV----PDVKGHPDLAWHIAQSLILDEFDMTMNQMDVDHGCTVPLSMIFGEPECKVIPFPVNVVTSGKRCFALGDSIRAAVESNVHVWGTGGMSHQL------QGPRAGLINKEFDLNFIDKLISD----PEELSKMPHIQYLRESGSEGVELVMWLIMRGALPEKVRDLYTFYNTALGAMILQP-TAG
10SPARKS1boub0.1310.9312.321threading_10--ARVTTGITSSH-IPALAIQTGPVFKGYQPIRDWINMPDVVILVYNHASAFDMAIGCAETFKPADEGWGPRP-----VPDVKGHPDLAWHIAQSLILDEFDMTMNQMDVDHGCTVPLSMIFGEPECKVIPFPVNVVTSGKRCFALGDSIRAAVESNVHVWGTGGMSHQLQGPRAGLIN------KEFDLNFIDKLIS----DPEELSKMPHIQYLRESGSEGVELVMWLIMRGALPEKVRDLYTFYHIPASNTALGAMILQ

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.940 to 2pw6A
TM-score=0.994 to native
SCOP code=c.56.6.1
TM-score=0.933 to 2pw6A
TM-score=0.988 to native
SCOP code=c.56.6.1
TM-score=0.935 to 2pw6A
TM-score=0.989 to native
SCOP code=c.56.6.1
TM-score=0.930 to 2pw6A
TM-score=0.984 to native
SCOP code=c.56.6.1
TM-score=0.931 to 2pw6A
TM-score=0.984 to native
SCOP code=c.56.6.1

  Experimental Structure

Download 2pw6A
SCOP code=c.56.6.1