Template-based Modeling Results for YGJQ_ECOLI


  Submitted Primary Sequence

>Length 230
MLRAFARLLLRICFSRRTLKIACLLLLVAGATILIADRVMVNASKQLTWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPFSEHGCPAQK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLRAFARLLLRICFSRRTLKIACLLLLVAGATILIADRVMVNASKQLTWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPFSEHGCPAQK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHEEECCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MLRAFARLLLRICFSRRTLKIACLLLLVAGATILIADRVMVNASKQLTWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPFSEHGCPAQK
22310121121001011001000000000000000002000101332222213202221000000022114101300110010032131200000022154323101001100132201230000122122111000202311222200000221101100100331202000010221213200111011000100000101002320321133120022233203248
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMLRAFARLLLRICFSRRTLKIACLLLLVAGATILIADRVMVNASKQLTWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPFSEHGCPAQK
1MUSTER3ca8A0.1160.8651.125threading_1-----------------------PFPTLSPATIDAINVIGQWLAQDDFSGE--VPYQADCVILAGNA-----VMPTIDAACKIARDQQIP-LLISGGIGHTGRAEATILADIAHQFHIPHEKIWIEDQSTNCGENARFSIALLNVHTAIVVQDPTMQRRTMATFRRMTPRWLSYPGFVPQFINQLQGLWPVERYLSLLTGELPRLRDDSDGYGPRVDFPAEVIHAWQTKH
2SPARKS3ca8a0.1270.8571.617threading_2-----------------------PFPTLSPATIDAINVIGQWLAQDDFSGEV--PYQADCVILAGNAV-----MPTIDAACKIARDQQI-PLLISGGIGHTGRAEATILADIAHQWHIPHEKIWIEDQSTNCGENARFSIALLRVHTAIVVQDPTMQRRTMATFRRMTPRWLSYPGFVPQLGNNADSVVERYLSLLTGELPRL--RDDSDGYGPRVDFPAEVIHAWQTLK
3PROSPECT23ca8A0.0960.8572.044threading_3PFPTLS---------PATIDAINVIGQWLA----------------QDDFSGEVPYQADCVILAGNA-----VMPTIDAACKIARDQQIPLLISGGIGRTTGRAEATILADIAHQWHIPHEKIWIEDQSTNCGENARFSIALLRVHTAIVVQDPTMQRRTMATFRRMTGDNPDAPRWLSYPGFVPQLGVERYLSLL--TGELPRLRDDSDGYGPRGR-DFIVHVDFPRSL
4PPA-I3ca8A0.1140.8391.045threading_4-----------------------PFPTLSPATIDAINVIGQWLAQDDFSGE--VPYQADCVILAGNAV-----MPTIDAACKIARDQQIPLLISGGTIRTTGRAEATILADIAHQFHIPHEKIWIEDQSTNCGENARFSIALLNVHTAIVVQDPTMQRRTMATFRRMTGDQLGNNADSVIFINQLQGLWPVERYLSLLTGELPRLRDDSDGYGPR-------GRDFIVHV
5HHPRED-l3ca8_A0.1290.8435.135threading_5------------PFPT-----------LSPATIDAINVIGQWLAQDDFSGE--VPYQADCVILAGNAVM-----PTIDAACKIARDQQIP-LLISGGIGHTGRAEATILADIAHQFHIPHEKIWIEDQSTNCGENARFSIALLNQHTAIVVQDPTMQRRTMATFRRMTGPWLSYPGFVPQLQGLWPV-ER-YLSL--LTGELPRLRDDSDGYGPRGDFPAEVIHAWQTL-
6HHPRED-g3ca8_A0.1300.8043.545threading_6---PFPT----LS--PA-----------TIDAINVIGQWL---AQD----DFSGEYQADCVILAGNAVM-----PTIDAACKIARDQQIP-LLISGGIGHTGRAEATILADIAHQFHIPHEKIWIEDQSTNCGENARFSIALLNQHTAIVVQDPTMQRRTMATFRRMTNPWLSYNADSVIQGLWPVERYLSLL-----TGELPRLRDDSDGYGPR-------GRDFIHVD
7SP33ca8a0.1150.8351.820threading_7-----------------------PFPTLSPATIDAINVIGQWLAQDDFSGEV--PYQADCVILAGNA-----VMPTIDAACKIARDQQI-PLLISGGIGHTGRAEATILADIAHQWHIPHEKIWIEDQSTNCGENARFSIALLRVHTAIVVQDPTMQRRTMATFRRMTPRWLSYPGFVPQLGNDSVIFINQLQGLWPVERYLSLL------TGELPRL-RDDSDGYGPRG
8SAM-T993ca8A0.1290.7391.848threading_8-----------------------PFPTLSPATIDAINVIGQWLAQDDFSG---EVPQADCVILAGNAVMPTI-----DAACKIARDQQIP-LLISGGIGSTTFAEATILADIAHQFHIPHEKIWIEDQSTNCGENARFSIALLRVHTAIVVQDPTMQRRTMATFRRMTGDNPDAPRDGYGPRGRDFIVHVDFPAEVIHAWQT----------------------------
9MUSTER1aq6A0.1230.9170.663threading_9MIKAVV-VQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWGVTREALAYTL-LGLEPDESFLADMAQDAAQCLAE-PLKRAILSNGA-------PDMLQALVANAGLTDDAVISDAKRVF-PDSYALVEEVLGVTEVLFVSS--N-GFDVGGAKNFGFSVARVA-----RLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRRG
10SPARKS3h5oa0.1310.9260.865threading_10TLTGIETVLDAAGQELQLLRAY---------LQHRPDGVLI-TGLSHAEPFERILSQHALPVVYDLADDGRCQEDAGAAITRHLLSRGKRRIGFLGAQLDERVKRLDGYRAALDAADCDAGLEWLDPQPSSQGADLDRALAERPDCDALFCCNDDLAIGALARSQQLGIADLQPAAWCTPPLTTVATPRRDIGVHAAKALLQLIDGEEPA--SRRADLGFRSSEG-----

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.514 to 2d13A
SCOP code=c.26.2.1
TM-score=0.502 to 2d13A
SCOP code=c.26.2.1
TM-score=0.514 to 2d13A
SCOP code=c.26.2.1
TM-score=0.504 to 2d13A
SCOP code=c.26.2.1
TM-score=0.482 to 1xkqA
SCOP code=c.2.1.2