Template-based Modeling Results for YHCF_ECOLI


  Submitted Primary Sequence

>Length 238
MNNVKLLIAGSAFFAMSAQAADRVSIDVKVTLEAAACTPILSNGGVVNFGSHSVNRLSTQHYTQIGTRNINMTITCESATGIAITARDTRMDSMTTGKDSGGQSGVKYTLNGGGYISQTTRLFGLGKTKDNKNIGSYAVLIDSNNISASNGSQTLAVSIAGADAVITGQKRAWQTLTAYPLAVDQSYYYTFVKPGETTPTPVTNAIIPLQVSASIANDLGGSEKIELDGKAVISVVYL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNNVKLLIAGSAFFAMSAQAADRVSIDVKVTLEAAACTPILSNGGVVNFGSHSVNRLSTQHYTQIGTRNINMTITCESATGIAITARDTRMDSMTTGKDSGGQSGVKYTLNGGGYISQTTRLFGLGKTKDNKNIGSYAVLIDSNNISASNGSQTLAVSIAGADAVITGQKRAWQTLTAYPLAVDQSYYYTFVKPGETTPTPVTNAIIPLQVSASIANDLGGSEKIELDGKAVISVVYL
CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEECCCCCCCCCEEEEEEEEEECCEEEECCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNNVKLLIAGSAFFAMSAQAADRVSIDVKVTLEAAACTPILSNGGVVNFGSHSVNRLSTQHYTQIGTRNINMTITCESATGIAITARDTRMDSMTTGKDSGGQSGVKYTLNGGGYISQTTRLFGLGKTKDNKNIGSYAVLIDSNNISASNGSQTLAVSIAGADAVITGQKRAWQTLTAYPLAVDQSYYYTFVKPGETTPTPVTNAIIPLQVSASIANDLGGSEKIELDGKAVISVVYL
4411111100000000002023201010201021010101024211000010013302233223122220201010303000001011222212220322203111312122101112221000003143321000000001112010142221000001013222213322111011221123312000002314211110110001010000013302023313011201020112
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNNVKLLIAGSAFFAMSAQAADRVSIDVKVTLEAAACTPILSNGGVVNFGSHSVNRLSTQHYTQIGTRNINMTITCESATGIAITARDTRMDSMTTGKDSGGQSGVKYTLNGGGYISQTTRLFGLGKTKDNKNIGSYAVLIDSNNISASNGSQTLAVSIAGADAVITGQKRAWQTLTAYPLAVDQSYYYTFVKPGETTPTPVTNAIIPLQVSASIANDLGGSEKIELDGKAVISVVYL
1PROSPECT23k4zA0.0800.8951.142threading_1ML----------------EDNSSTLPPYKNDLLCYPWHTCEDSGGKCSFDVVDVPGQPGNTLEQGHTYRVRLKIWADASCKVYIKIGQMGEPY---------AEYWNNKWSPYTLTAGKVLEIDETFVMDKPTDDTCEFTFHLGGELAATPPYTVYLDDYTKPVEYILPQPDVRVNQVGYLPEGKKVATVVCNSTQPVKWQLKNVVLEGYTEPKGLDYVHWLDFSDFATEGIGYYFEL
2HHPRED-l2w07_B0.1430.5001.993threading_2------------------------------NVYIPPCTINNGQNIVVDFGNINPEHVDNSR----GEVTKTISISCPY--SLWIKVTG-NTMGGG-----------------------QNNVLA-T-NITHFGIALY----Q-----GKGMSTPLT-----------L-----------------------------------RSTFTFTSVPFRNGSGIL-NGGDFRTTASMSMIY-
3HHPRED-g2uy6_B0.0920.5922.273threading_3------------------------KVTFNNTVVDAPCSISQKADQSIDFGQLSKSFLEAGGV--SKPMDLDIELNCDITATVKLAFTGPIV-N------------------------GHSDELDT---NGGT--GL-AIVV-QG----AGKNVVFDGS-----------EGDA-----NT------------L------KD-GENVLHYTAVVKKSSVGAAVTEGAFSAVANFNLTYQ
4PROSPECT21sqjA10.0910.8781.107threading_4MGR---------------NNGERLAVNEVWMGTRTEGIWKSSDRAK-TWTNVTSIPDAFTNGIFDPERNGTIYASATAPQGM-YVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPN----FLYVTYADYPGPWGVTFGEVWRQNRTSGADITPRVGNSSPAPYNNQTFPAGGFCGLSVDATN--------PNRLVVITLDRDPGPALDSIYLDAGATWKDVNW
5HHPRED-l2jty_A0.1710.6391.784threading_5----------------AATTVNGGTVHFKGEVVNAACAVDAGVDQTVQLGQVRTASLAQEG-ATSSAVGFNIQLNCDTNSKAAVAFLGTAIDAGHT------------------------NVLALSSAGSATNVGV---QILD----RTGAALTL------DG---------------------ATFSSETTLN-------NGTNTIPFQARYFATG--AA-TPGAANADATFKVQY-
6HHPRED-g2jty_A0.1550.6512.272threading_6----------------AATTVNGGTVHFKGEVVNAACAVDAGVDQTVQLGQVRTASLAQEGA-TSSAVGFNIQLNCDTNSKAAVAFLGTAIDAGH-----TN-------------------VLALQSSAAG-SATNVGVQILD----RTGAALTL---------------------------DGATFSSET-------TLNNGTNTIPFQARYFATG--AA-TPGAANADATFKVQYQ
7PROSPECT23t2lA0.0750.8991.094threading_7LR---------------------VPLQVSSAVIKQEVDPVPLTEGAIGIFLSGT---EPEDSGYKVIDNRKYVYSLVGNDADVCAYYPYKDSYTDKTVIPLQSQDYVETELNTINGFTPAITFDSRENYFPCEISKITLKNSNLIKKGAVDGSIHSSETGNYDLTTVTDASPHTLSVGESYVCRVLIPVPLKIERTDAEGGEFGLSVSLVIDGQQLVEIPYSELGEFRQKYVIGLKIE
8HHPRED-l2uy6_B0.0860.5841.768threading_8------------------------KVTFNNTVVDAPCSISQKADQSIDFGQLSKSFLEAGGV--SKPMDLDIELNCDITATVKLAFTGPIV-NG------------------------HSDELDT--N-GGTG--L-AIVVQ-----GAGKNVVFDGS-----------EGDA-----NT------------LKD-------GENVLHYTAVVKKSSGAAV-TEGAFSAVANFNLTY-
9HHPRED-g2w07_B0.1530.4962.271threading_9------------------------------NVYIPPCTINNGQNIVVDFGNINPEHVDNSR----GEVTKTISISCPY--SLWIKVT-GNTMGGG----------------------QN-NVLA-T-NITH--FG---IALY----QGKGTPLTL------------------------------------------------RSTFTFTSVPFRNGS-GILNGGDFRTTASMSMIYN
10PROSPECT23sy6A0.0880.9031.069threading_10-------------------SGEKTLAVVSASSDDRPSTRGIINDNTYALGIYSGGEWGADDVIKVDYRNASFFAYYPYAGGTTLTLQAQLFNAGEDICYGAGEASGGGPVSVYNPFVEFLNKHAYARKTKKCNIQNITFKSNNANFY----LTRSLDIASTAGATGGSAVAAGYVHNPNVNIATGKSVTYEYFPPQPLDGSKLTILVTVDGVTRSCDISTLGSSLDSGKYYGVSLTFT

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.470 to 1guiA
SCOP code=b.18.1.14
TM-score=0.543 to 1pdkB
SCOP code=b.2.3.2
TM-score=0.677 to 2uy7B
SCOP code=b.2.3.2
TM-score=0.677 to 2ebsB
SCOP code=b.69.13.1
TM-score=0.595 to 1pdkB
SCOP code=b.2.3.2