Template-based Modeling Results for YHCM_ECOLI


  Submitted Primary Sequence

>Length 375
MQSVTPTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSTPPAPRTSGLMARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQRLHFHRFMLRVHEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLMKALFARGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQHCDVMNVDAGVDYRLRTLTQAHLWLSPLHDETRAQMDKLWLALAGGKRENSPTLEINHRPLATMGVENQTLAVSFTTLCVDARSQHDYIALSRLFHTVMLFDVPVMTRLMESEARRFIALVDEFYERHVKLVVSAEVPLYEIYQGDRLKFEFQRCLSRLQEMQSEEYLKREHLAG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQSVTPTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSTPPAPRTSGLMARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQRLHFHRFMLRVHEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLMKALFARGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQHCDVMNVDAGVDYRLRTLTQAHLWLSPLHDETRAQMDKLWLALAGGKRENSPTLEINHRPLATMGVENQTLAVSFTTLCVDARSQHDYIALSRLFHTVMLFDVPVMTRLMESEARRFIALVDEFYERHVKLVVSAEVPLYEIYQGDRLKFEFQRCLSRLQEMQSEEYLKREHLAG
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEECCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MQSVTPTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSTPPAPRTSGLMARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQRLHFHRFMLRVHEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLMKALFARGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQHCDVMNVDAGVDYRLRTLTQAHLWLSPLHDETRAQMDKLWLALAGGKRENSPTLEINHRPLATMGVENQTLAVSFTTLCVDARSQHDYIALSRLFHTVMLFDVPVMTRLMESEARRFIALVDEFYERHVKLVVSAEVPLYEIYQGDRLKFEFQRCLSRLQEMQSEEYLKREHLAG
554211222122004322133132022002202200320141222234222222321311233332432212100000011201100000002102234421110020002003101212332100210022023302000001010120000100000020003210000000111122014311212201100300230010010222111212222313112021233021101300220122343322202023020102112320000001200322221110110032020000110121142131102100100110042201000002021220122331112021002102421233113333234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMQSVTPTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSTPPAPRTSGLMARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQRLHFHRFMLRVHEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLMKALFARGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQHCDVMNVDAGVDYRLRTLTQAHLWLSPLHDETRAQMDKLWLALAGGKRENSPTLEINHRPLATMGVENQTLAVSFTTLCVDARSQHDYIALSRLFHTVMLFDVPVMTRLMESEARRFIALVDEFYERHVKLVVSAEVPLYEIYQGDRLKFEFQRCLSRLQEMQSEEYLKREHLAG
1SPARKS2w58a0.1960.4771.582threading_1IQSMFMPREILRA-SLSDVDNDDGRIKAIRFAERFVAEY--------------------------EPGKKMKGLYLHGSFGVGKTYLLAAIANEL-AKRNVSSLI----VYVPELFRELKHSQT-MNEKLDYIKK-VPVLMLDDLGAESWVRDDVFGPILQYRMFENLPTFFTSNFDMQQLAHHLTYSQKAARIMERIRYLAYPIEITGP-NRR-----------------------------------------------------------------------------------------------------------------------------------------------------------------
2PROSPECT21w36B10.1151.0001.204threading_2MSDVAEAALYLRLLLGLGGSAAAATAELRGRIRSNIHELRIACLRETTDNPLYERLLEEIDDKNAFESGMLFEQQLIEDESLLRYQACADFWRRAPPPDIRDLVITRALAEIRETVAREKRRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWNKLFSQQALRFVFKGMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRISVLVRSRQEAAQVRDALTLLYLSNRDRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQEQAFYHDRHSFEAVLDLNAAPESVDLAEAERLAEDLRLLYVAVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGERTCIEALCDDD
3HHPRED-l2w58_A0.1580.4561.810threading_3SMFMPR--EILRASLSDVDLNDDGRIKAIRFAERFVAEY--------------------------EPGKKMKGLYLHGSFGVGKTYLLAAIANELAKRSSLIVYVPELFRELKHS--------QTMNEKL-DYIKKVPVLMLDDLGAE-WVRDDVFGPILQYRMFENLPTFFTSNFDMQQLAH----KVKAARIMERIRYLAYPIEITGP-NRR-----------------------------------------------------------------------------------------------------------------------------------------------------------------
4PROSPECT23a6pA10.0850.9441.152threading_4AMDQVNALCVKAVTVMMDPNSTQRYRLEALKCVPCGLRLAEKTQSRLEKVYLKNSVMELIANGTLNILEEENEMIKREWPQHWPD-MLIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPRIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALN--TLAGYIDWVSMSHITAENCKLLEILCLLGAAECLLIAVSRKGKLEDRKPLMVLQTADGGGLVEKHYVFLKRLCQVLCDSDVETPSNFG------------------KYLESFLAFTTHPSQFLRSSTQMTWGALFRHEILSRDPLLLAIIPKYLRASMTNLVKMGFPSKTDYSRFDFDSDEDFFFNSSRAQQGEVMRGEWLKYQLSTF
5HHPRED-g2w58_A0.1690.4592.295threading_5SMFMPR--EILRASLSDVDLNDDGRIKAIRFAERFVAEY---------------------E-----PGKKMKGLYLHGSFGVGKTYLLAAIANELAKRSSLIVYVPELFRELKHS--------QTMNEKLDYIK-KVPVLMLDDLGA-SWVRDDVFGPILQYRMFENLPTFFTSNFDMQQLAHH---KVKAARIMERIRYLAYPIEITG-PNRR-----------------------------------------------------------------------------------------------------------------------------------------------------------------
6SPARKS1l8qa0.1190.8081.125threading_6-DFLNP------KYTLENFIVGEGNRLAYEVVKEALE----------------------------NLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSS--ADDFAQAVEHLKKGT----INEFRNYKSVDLLLLDDVQFGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKL--DGVS----DRLVSRFEGG-ILVEIELDNKTRFKIIKELKEFNLELRKEVIDYLLENVREIEGKLKGFEGLERKERKERDKLQIVEFVANYKVEDILSDKRNKR--TSEARKIAYLCRK---VCSASLIEIARAF--------KRKDHTTVIHAIRSVEEEKKRKFKHLVGFLEKQAFDKIC-----------
7SP32w58a0.1940.4801.565threading_7IQSMFMPREILRASLSDVDLNDDGRIKAIRFAERFVAEY--------------------------EPGKKMKGLYLHGSFGVGKTYLLAAIANEL-AKRNVSSLIV-YVPELFRELKHSQTMNEKLDYIKK-----VPVLMLDDLGAESWVRDDVFGPILQYRMFENLPTFFTSNFDMQQLAHHLTYSQKAARIMERIRYLAYPIEITGP-NRR-----------------------------------------------------------------------------------------------------------------------------------------------------------------
8PROSPECT22fnaA0.1080.7871.146threading_8LFDTSPKDNRKDFFDR---------EKEIEKLKG----------------------------------LRAPITLVLGLRRTGKSSIIKIGINELNLEERNYISYKDFLLELQKEINKLVKRLPSL---LKALKNIQGIVIGNEIKFNRLSFANLLESFEQA--SKDNVIIVLDEAQELVKLRGVNLLPALAYAYDNLKRIKFISGSEGLLYDYLRVEDPESPLFGPFSREEAIEFLRRGFQEADIDFKDYEVV--------------------YEKIGGIPGWLTYFGFIYLDNK------------NLDFAINQTLEYAKKLILKEFENFLHGREIARKRYSKCGKWSDVKRALELEEDSEIYNYLTQLTKHS
9SAM-T992qgzA0.2090.3951.207threading_9VNNASRMEAFSAILDFVEQYPSAEQ----------------------------------------------KGLYLYGDMGIGKSYLLAAMAHELSGVSTTLLHFPSFAIDVKNAISKEE-----------DAVKNVPVLILD-----DIGAVRVLQVILQYRMLEELPTFFTSNYSFADLERWAWQAKRVMERVRYLAREFHLEGANRR---------------------------------------------------------------------------------------------------------------------------------------------------------------------
10HHPRED-l2ce7_A0.1440.7791.808threading_10---YKPS-------GNKRVTFKDGAEEAIEELKEVVEFLKD---P------------SKFNR---IGARMPKGILLVGPPGTGKTLLARAVAGEANVPFF-HISGSDFV-------ELFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGREQTLNQLLVEMDKEGIIVMAATNRPPALLRPGRFDKKIVVDRKKILEIHTRNKPLAEDVNLEIIAKRTP--GFVGISPAEIIAYHEAGHAVVSPNGEPVHRISII------------KYLVSRNELLDKTSGAANDIERATEMV---------LRNYSEEVAEEVKKIVTNCYERAKEIIRKYR-------------KQLDNIVEILLEKET-----------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.618 to 1l8qA
SCOP code=a.4.12.2
TM-score=0.555 to 1w36E
SCOP code=c.37.1.19
TM-score=0.611 to 1l8qA
SCOP code=a.4.12.2
TM-score=0.563 to 1ialA
SCOP code=a.118.1.1
TM-score=0.613 to 1l8qA
SCOP code=a.4.12.2