Template-based Modeling Results for YHHN_ECOLI


  Submitted Primary Sequence

>Length 208
MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQAPMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALSAFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQAPMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALSAFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQAPMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALSAFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL
3210000000000000011231220111001000000000000202222110000000000000010021023321010000000000000000012122211210000010000000011214133120000000000000000001211122211000000000000000000001202230300000000000000000000122
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQAPMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALSAFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL
1SPARKS1is2a20.0470.4131.158threading_1--------------------------------------------------------------------------------------------------------------------------VDINSLEGLTEAYKLRAARLVEIAAKNLQTHVSDLVRASEAHCHYVVVKVFSDKLPKIQDKAVQAVLRNLCLLYSLYGISKGGDFL
2PROSPECT21r2fA0.1301.0001.247threading_2IDLEVWNRLTSSNDIPAWQTLSAAEQQLTIRVFTGLTLLDTIQNADAITPHEEAVLSNISFMSYSSIFSTLCQTKEVDAAYAWSEPPLQRKAQIILAHYVSDEPLKKKIASVFLWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIQIALQKLSAIEREELKLFALDLLMELYYTEALYAETGWVNDVKAFLCYNANKALILAALSP
3PPA-I2vpyC0.1630.9761.330threading_3FVLVGLAGGVALLAALLHLKGDAEARRYTLYALMLIALDLFILWAESPASPIWWGAWGLGLGFLTGGLLYLGKGSLAWALLVFSLVALSYPGLALAVNLNRPLWLFPLTALVLALGLAALLKSPWALFPLRVLAGASLLLALLYP-----LTLPPEARGHLLEEAGFWYGLFLLLGLGTFWQERLAPWAGLLAAAGLRALLVLAGQWQ
4SPARKS3ipia0.1170.9901.157threading_4EEWEEYRYVEAGIKESITLIEDPKKVEHVCHIRPIILLLVSEICSGSYSRSLNAALAVESASLIHDDLLDQGLPEKFGPSGALLCGDYLIAKSIAFISP--YGEKVIQDFGKAGDAEGEVLDLKENDYFKCIYKKTASLFAISASIGAYTGGAEERFSHFGNALGTAYQIVDDILEFLEVVESTSKEEALKKSIDCVKLHVAAAKETL
5PROSPECT23a0oA30.0671.0001.240threading_5PNHCGWAEFYEKSVEPWLERPVMQMYIDCQEVIYAIRHLAIAGRTSRAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARIHVFPAVRSLSAVLTPACIALQGESDEAGEWLDYTVGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLLKLGYNVRQFAGVTGNGHYQWYFDHIKADALNFDDLVY
6PPA-I3mvpA0.1070.8511.227threading_6-----------------KNIRKPKQERSIEKRNKILQVAKDLFSDASKEDILTALLKRYNDFFLTTIFADINSQDSLDRFKKNPKEWLNVLINQLLAAED------------KIFHAQIELAYAIPQAKALLEEHNNNLKNLTYKCLLYYSDQAANPSFKTLSLVVFDFISALVDELLYHEHTQEEAHQIKKTGIDSLDLIIKSYL--
7SPARKS2zuea0.1020.8461.091threading_7FTVDEVIQEAVKRARELIEEKNPEEKAEVAEKVGIGAIRYNLIKYSPDKKIIF------------RWEDVLNFEGESAPYIQYAHARCSSILRKAEEEGIKVDPETLFKNAD---------FTKLSERERELVIMLSKFPRIVEQAGKD--VKPH---------LIAWFANELASLFNKFDHPVEGVREARLLLVMAVEQVLKNALYL
8PROSPECT21t33A0.1200.9181.216threading_8MKSQLIAAALAQFGEAALAGQNIAAITYYFGSKEDLYLACAQW-------IADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQ----------EDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDAILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIILHGLTQ
9PPA-I1t33A0.1210.8321.173threading_9QNIAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQ-------VIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILPQFDEEKAELIYQTVTCHIDLILHGLTQ----------------------------
10SPARKS1fcha0.1690.8271.086threading_10EAWQYLGTTQAE--------NE--------QELLAISALRRCLELKPDNQTALMALAVSFTNEQRQACEILPAYASLLSDSLFLEVKELFLAAVRLDPTSID----PDVQCGLGVLFNL-----SGEYDKAVDCFTAALSV-----------RPNDYLLWNKLGATLANGNQSEEAVAAYLQPYIRSRYNLGISCILGAHREAVEHFL

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.514 to 1hrbA
SCOP code=a.24.4.1
TM-score=0.453 to 2pmsC
SCOP code=h.4.19.1
TM-score=0.727 to 2bq1I
SCOP code=a.25.1.2
TM-score=0.508 to 1tqgA
SCOP code=a.24.10.3
TM-score=0.746 to 1v4jA
SCOP code=a.128.1.1