Template-based Modeling Results for YHII_ECOLI


  Submitted Primary Sequence

>Length 355
MDKSKRHLAWWVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATEVDIASKIAGRIDTILVKEGKFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISAQQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPRDGRVQYRVAEPGEVLAAGGRVLNMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNEELPWPDDLVVRLPQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDKSKRHLAWWVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATEVDIASKIAGRIDTILVKEGKFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISAQQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPRDGRVQYRVAEPGEVLAAGGRVLNMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNEELPWPDDLVVRLPQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEECCCCCEEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEEEEECCCCCEECCCCCEEEEEECCCEEEEEECCHHHHHCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MDKSKRHLAWWVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATEVDIASKIAGRIDTILVKEGKFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISAQQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPRDGRVQYRVAEPGEVLAAGGRVLNMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNEELPWPDDLVVRLPQ
5543443111000000000000000002111123220001010201101000311010110104222203321100201232012112201111320121012021213222110310222023121112201311210221143211023102212210210221121022101102211321322123022202102110220011132120101320101111023011012112000001122010001021310220321120200010023120201000002202111421322321120001020201232233323202110001010203332312331224235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMDKSKRHLAWWVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATEVDIASKIAGRIDTILVKEGKFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISAQQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPRDGRVQYRVAEPGEVLAAGGRVLNMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNEELPWPDDLVVRLPQ
1MUSTER3fppB0.1720.7352.057threading_1---------------------------RPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVID---------------------PEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVS---------------------QQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPT------PEKVND-----AIFYYARFEVPNPN---GLLRLDMTAQVHIQLTDVKN-----------
2SPARKS3fppa0.2060.7384.576threading_2-----------------------------PGDLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLME---------------------LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKR---------------------NQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPT------PEKVNDA-----IFYYARFEVPNPN---GLLRLDMTAQVHIQLTDVKNVLT--------
3PROSPECT23fppA0.1950.7383.571threading_3PGD-----------------------------LQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLM---------------------ELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQ---------------------IKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPE-----KVNDAIFYYARFEVP---------NPNGLLRLDMTAQVHIQLTDVKN--------VLT
4PPA-I3fppB0.1670.7442.932threading_4---------------------------RPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVID---------------------PEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVS---------------------QQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPT------PEKVNDA---IFYYARFEVP-----NPNGLLRLDMTAQVHIQLTDVKNVLT--------
5HHPRED-l3fpp_A0.1920.7324.452threading_5-----------------------------PGDLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQA---------------------EAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIG---------------------TIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPEKVNDA---------IFYYARFEVPN-----PNGLLRLDMTAQVHIQLTDVKNV----------
6HHPRED-g3fpp_A0.2030.7354.507threading_6------------------------------PGDLQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLME---------------------LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQ---------------------IKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTP------EKVNDA-----IFYYARFEVPNP---NGLLRLDMTAQVHIQLTDVKNV-----LT---
7SP33fppa0.2060.7383.738threading_7-----------------------------PGDLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMEL---------------------RAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKR---------------------NQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPT------PEKVNDA-----IFYYARFEVPNPN---GLLRLDMTAQVHIQLTDVKNVLT--------
8SAM-T993fppB0.1980.7134.779threading_8----------------------------RPGDLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQR---------------------QQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTI---------------------DAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPE---------KVNDAIFYYARFEVPNPN-----GLLRLDMTAQVHI------------------
9MUSTER3lnnA0.1800.7661.512threading_9VPAES--PLRRTLAVAPAT----------RETVAAPFNLPAMIEADLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD--------------------------------LAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLQAGGG-------------------HILAVRSPINGRVVDLNAATGAYWNDTASLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAYDD-PQPGKVRYVGQI-------DADTR-------TTKVRMVFDNPD---GRLRPGMFAQATFLSQPHE--PMSAIVQSGF
10SPARKS3lnna0.1820.7583.215threading_10VPAESPLRRTLAVAPAT------------RETVAAPFNLPAMIEADLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD--------------------------------LAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLQAGGG-------------------HILAVRSPINGRVVDLNAATGAYWNDTTSLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAYDDP-QPGKVRYVGQIL------DADTRT-------TKVRMVFDNPD---GRLRPGMFAQATFLSQPHE------GIVVPM

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.494 to 1iyuA
SCOP code=b.84.1.1
TM-score=0.495 to 1iyuA
SCOP code=b.84.1.1
TM-score=0.492 to 1iyuA
SCOP code=b.84.1.1
TM-score=0.465 to 1gjxA
SCOP code=b.84.1.1
TM-score=0.489 to 1iyuA
SCOP code=b.84.1.1