Template-based Modeling Results for YHIR_ECOLI

Submitted Primary Sequence

>Length 280
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARLLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGIAEGYKRFATGIYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARLLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGIAEGYKRFATGIYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARLLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGIAEGYKRFATGIYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
3212200101000000010000000020133333000000000000001012320221121120001003333022202100200331142231310010010012002331100001012210210122035222020020100100232012223200000101132421021002000200430220000000001133102300310241214200001000123334310100000000011202310230021003201323212010101246
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARLLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGIAEGYKRFATGIYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
1	MUSTER	2oo3A	0.395	0.939	3.270	threading_1	--------HAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKD----KTEEYKEGINPVWLRENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISS-KSVRIELHLNPLINE-GMTGCGLWIINPPYTFPSEIKLVLETLTTYFNP-GSSSYMIES--SK
2	SPARKS	2oo3a	0.392	0.939	7.852	threading_2	--------HAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKD----KTEEYKEGINPVWLDENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREIS-SKSVRIELHLNPLINE-GMTGCGLWIINPPYTFPSEIKLVLETLTTYFNPGS-SSYMIES--GS
3	PROSPECT2	2oo3A	0.389	0.946	4.634	threading_3	--------HAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKD----KTEEYKEGINPVWLDENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREIS-SKSVRIELHLNPLINE-GMTGCGLWIINPPYTFPSEIKLVLETLTTYFNPGS-SSYMIESGSKC
4	PPA-I	2oo3A	0.389	0.946	7.238	threading_4	--------HAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKD----KTEEYKEGINPVWLRENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREIS-SKSVRIELHLNPL-INEGMTGCGLWIINPPYTFPSEIKLVLETLTTYFNPG-SSSYMIESGSKL
5	HHPRED-l	2oo3_A	0.390	0.943	12.343	threading_5	--------HAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKDK----TEEYKEGINPVWLRENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISS-KSVRIELHLNPLIN-EGMTGCGLWIINPPYTFPSEIKLVLETLTTYFNPGSSS-YMIESGSK-
6	HHPRED-g	2oo3_A	0.389	0.946	10.860	threading_6	--------HAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKDK----TEEYKEGINPVWLRENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISS-KSVRIELHLNPLIN-EGMTGCGLWIINPPYTFPSEIKLVLETLTTYFNPGSSS-YMIESGSKL
7	SP3	2oo3a	0.390	0.943	7.485	threading_7	--------HAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKD----KTEEYKEGINPVWLDENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISS-KSVRIELHLNPLINE-GMTGCGLWIINPPYTFPSEIKLVLETLTTYFNPGS-SSYMIES-GSK
8	SAM-T99	2oo3A	0.391	0.950	8.672	threading_8	--------HAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKDK----TEEYKEGINPVWLRENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREI-SSKSVRIELHLNPLI-NEGMTGCGLWIINPPYTFPSEIKLVLETLTTYFNPGSSSYMIESGSKLC
9	MUSTER	2oo3A1	0.445	0.521	1.665	threading_9	--------HAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKD----KTEEYKEGINPVWLRENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKR--------------------------------------------------------------------------------------------------------------------------
10	SPARKS	2pwya	0.151	0.782	0.842	threading_10	LVFPKEGGVFHHHKGSVPH-------EALLEAGPG-GVVRTHLGEELSVHRPT--------LEEYLLHMKRSATPTYPKDASAMVTLLDLAPGMRVLTGSTLFLARAVGEKGLVESYEARPHHLAQAERNVRAVENVRFHLGKLEEA----ELEEAAYDGVALDLM-----EPWKVLEKAALALK--PDRFLVAYLP--NITQVLELVRAAEAHPWREWEVRLPVAHPRFQQVGHTAFLVALRRWKGS--------------------------------

Predicted Tertiary Structure


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TM-score=0.962 to 2oo3A SCOP code=c.66.1.59	TM-score=0.964 to 2oo3A SCOP code=c.66.1.59	TM-score=0.960 to 2oo3A SCOP code=c.66.1.59	TM-score=0.966 to 2oo3A SCOP code=c.66.1.59	TM-score=0.966 to 2oo3A SCOP code=c.66.1.59