Template-based Modeling Results for YIBA_ECOLI

Submitted Primary Sequence

>Length 280
MSNTYQKRKASKEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNNMALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVINDKATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVEMLQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDKTLLPVLDTMLYKFDDNEIITSAIDKLKRS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSNTYQKRKASKEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNNMALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVINDKATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVEMLQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDKTLLPVLDTMLYKFDDNEIITSAIDKLKRS
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSNTYQKRKASKEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNNMALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVINDKATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVEMLQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDKTLLPVLDTMLYKFDDNEIITSAIDKLKRS
5523200220031002133234120320030032322210110030033211330031003002232221110002000203113302210010012102323222000000200021133332212300310221121322200200010022022320021003103232120011002003113232230030003103232320102001001223233002100320343211210020013012320020022003423333001101231445
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSNTYQKRKASKEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNNMALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVINDKATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVEMLQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDKTLLPVLDTMLYKFDDNEIITSAIDKLKRS
1	MUSTER	1oyzA	0.985	0.964	2.202	threading_1	----YQKRKASKEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNN-ALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVIA---TIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVEL-QDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDKTLLPVLDTLY-KFDDNEIITSAIDKLKRS
2	SPARKS	1oyza	0.948	0.964	4.253	threading_2	----YQKRKASKEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILN-NALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVIAT---IPLLINLLKDPNGDVRNWAAFAININKYDN-SDIRDCFVELQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDKTLLPVLDTLY-KFDDNEIITSAIDKLKRS
3	PROSPECT2	1oyzA	0.933	0.964	2.696	threading_3	----YQKRKASKEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNN-ALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVIATI---PLLINLLKDPNGDVRNWAAFAININKYDN-SDIRDCFVELQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDKTLLPVLDTLYKFDDN-EIITSAIDKLKRS
4	PPA-I	1oyzA	0.956	0.964	2.005	threading_4	----YQKRKASKEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNN-ALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVIA---TIPLLINLLKDPNGDVRNWAAFAININKYDN-SDIRDCFVELQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDKTLLPVLDTLY-KFDDNEIITSAIDKLKRS
5	HHPRED-l	1oyz_A	1.000	0.961	5.188	threading_5	----YQKRKASKEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNN-ALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVI---ATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVE-LQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDKTLLPVLDT-LYKFDDNEIITSAIDKLKR-
6	HHPRED-g	1oyz_A	1.000	0.964	3.615	threading_6	----YQKRKASKEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNN-ALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVI---ATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVE-LQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDKTLLPVLDT-LYKFDDNEIITSAIDKLKRS
7	SP3	1oyza	0.941	0.964	4.437	threading_7	----YQKRKASKEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILN-NALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVIAT---IPLLINLLKDPNGDVRNWAAFAININKY-DNSDIRDCFVELQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDKTLLPVLDTLY-KFDDNEIITSAIDKLKRS
8	SAM-T99	3ltjA	0.258	0.650	3.766	threading_8	----------------------------------------------------------------------------------DPE------KVEMYIKNLQDDSYYVRRAAAYALGKIG------DERAVEPLIKALKDEDAWVRRAAADALGQIGDERAVEPLIKALKDEDGWVRQSAAVALGQI--GDERAVEPLIKALKDEDWFVRIAAAFALGEIGDERAVEPLIKALKDEDVRQSAADALGEIGGERVRAAMEKLA-ETGTGFARKVAVNYLET-
9	MUSTER	3ltjA	0.238	0.675	1.456	threading_9	---------------HHHHTDPEKVEMYIKNLQDDSYYVRRAAAYALGKIGDERAVEPLIKALKDEDAWVRRAAADALGQIGDER-------------------------------------------AVEPLIKALKDEDGWVRQSAAVALGQIGDERAVEPLIKALKDEDWFVRIAAAFALGEI--GDERAVEPLIKALKDEDGWVRQSAADALGEIGGERVRAAMEKLAETGTARKVAVNYLETHK-------------------------------
10	SPARKS	3ltja	0.257	0.682	3.075	threading_10	---------------HHHHTDPEKVEMYIKNLQDDSYYVRRAAAYALGKIGDERAVEPLIKALKDEDAWVRRAAADALGQIGDER-----AVEPLIKAL-KDEDGWVRQSAAVALGQIGD------ERAVEPLIKALKDEDWFVRIAAAFALGEIGDERAVEPLIKALKDEDGWVRQSAADALGEI--GGERVRAAMEKLAETGTGFARKVAVNYLETHK------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.974 to 1oyzA TM-score=0.991 to native SCOP code=a.118.1.16	TM-score=0.970 to 1oyzA TM-score=0.987 to native SCOP code=a.118.1.16	TM-score=0.974 to 1oyzA TM-score=0.991 to native SCOP code=a.118.1.16	TM-score=0.970 to 1oyzA TM-score=0.988 to native SCOP code=a.118.1.16	TM-score=0.970 to 1oyzA TM-score=0.988 to native SCOP code=a.118.1.16

Experimental Structure

Download 1oyzA

SCOP code=a.118.1.16