Template-based Modeling Results for YIDX_ECOLI


  Submitted Primary Sequence

>Length 218
MKLNFKGFFKAAGLFPLALMLSGCISYALVSHTAKGSSGKYQSQSDTITGLSQAKDSNGTKGYVFVGESLDYLITDGADDIVKMLNDPALNRHNIQVADDARFVLNAGKKKFTGTISLYYYWNNEEEKALATHYGFACGVQHCTRSLENLKGTIHEKNKNMDYSKVMAFYHPFKVRFYEYYSPRGIPDGVSAALLPVTVTLDIITAPLQFLVVYAVNQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLNFKGFFKAAGLFPLALMLSGCISYALVSHTAKGSSGKYQSQSDTITGLSQAKDSNGTKGYVFVGESLDYLITDGADDIVKMLNDPALNRHNIQVADDARFVLNAGKKKFTGTISLYYYWNNEEEKALATHYGFACGVQHCTRSLENLKGTIHEKNKNMDYSKVMAFYHPFKVRFYEYYSPRGIPDGVSAALLPVTVTLDIITAPLQFLVVYAVNQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEECCCCCCCCCEEEEECCCCEEECCCCHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCEEEEEEEEEECCCHHHHHHHHHCCEECCCCCCCEEEEECCEEEECCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEEEECCEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLNFKGFFKAAGLFPLALMLSGCISYALVSHTAKGSSGKYQSQSDTITGLSQAKDSNGTKGYVFVGESLDYLITDGADDIVKMLNDPALNRHNIQVADDARFVLNAGKKKFTGTISLYYYWNNEEEKALATHYGFACGVQHCTRSLENLKGTIHEKNKNMDYSKVMAFYHPFKVRFYEYYSPRGIPDGVSAALLPVTVTLDIITAPLQFLVVYAVNQ
55122300120000000000010000110023224222121102312000002033222230000002210100121022003002321124320201320201022244201010101022233311200231111022330120012020001334331311201212210202001122342233111000000000000000101000000135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKLNFKGFFKAAGLFPLALMLSGCISYALVSHTAKGSSGKYQSQSDTITGLSQAKDSNGTKGYVFVGESLDYLITDGADDIVKMLNDPALNRHNIQVADDARFVLNAGKKKFTGTISLYYYWNNEEEKALATHYGFACGVQHCTRSLENLKGTIHEKNKNMDYSKVMAFYHPFKVRFYEYYSPRGIPDGVSAALLPVTVTLDIITAPLQFLVVYAVNQ
1PPA-I1zrtE0.0960.8171.164threading_1-----RRDFLYHATAATGVVVTGAAVWPLINQMNASADV----KAMASIFVDVSAVEVGTQLTVKWRGKPVFIRRRDEKDIELARSVPLGALRDTSAENAN-------------------KPGAEATDENRTLPAFDGTNTGEWLVMLGVCTHLGCVPMGDKSGDFGGWFCPCHGSHYDSAGRRKGPAPRNLDIPVAAFVDEIKLG------------
2HHPRED-l1kqf_A0.1120.7751.140threading_2----------------------------------QARN--YKLLAKEIRNTLMYSLGDGREAIYIEGDPDH-PVSRGGAGLLDYV----NSENRLR--YPEYRA--PGSDKW---QRISWERIAKLMKADRDANFIEKNEQGVTVNRWLSTGMLCASGASNETGMTQSLGANVVMVMGGNAHPVGNNNDATLVVTRTASVADITLSGLRYLIKINTN-
3PPA-I2r55A0.0810.7891.079threading_3-------------FQSMAAQMSEAVAEKMLQYRRDTAGWKICREGNGVSVSWR--PSVEFPGNLYRGE---GIVYGTLEEVWDCVKPGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAM----------------KLISPRDFVDLVLVKRYEDGT------------ISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPPTKTNLVTFFH
4HHPRED-l2w7y_A0.0990.6511.063threading_4---------------------------------------------EVLEFYHYHHSEH--SGVEFK-----PTPVNDLDI-NNKVASGE-FPDVIDLAGNAVSLAIE-QKLV--------LDLKPYIDSKLEKNNYQKDGKIYTHEQLFT-GLWYNKDIGAPWDDFTSIRKVYAFG-----A--GEP--SIRLFNTVLGGRKLLDSKLK--KEITIS-
5HHPRED-l2vpz_A0.0960.7661.026threading_5--------------------------------AP-WYAQE----VKSVYQIVAHAVG---NRVYVEGYEANP-KSRGRQGAPQTT----YDPDRLK--RPLIRVEQRGEGKY---RVATWEEIAKKMLEIREKYGPEWGSPNAAKPCTWVFGRPIGGHIDWENAYIVGEDTHTQAKVVVRFSTAAAKAHRWLPIKPGALLLALIYEDIKGLFAYGIN-
6MUSTER1sezA0.1110.9540.665threading_6SHESVSGFFQRHFGKEVVDYLIDPFVAGTCGGDPDSLSHHSKRFGSVILGAIRSKLSKTSAN---KKRQRGSFSFLGGQTLTDAICK-DLREDELRLNSRLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVITAP------LCDVKSKIAKRGNPFLLNFIPEVDYVSVVITTFKRENVKYPLEGFGVLVPKTLGTLFSSFPNVYLYTTFVGG
7SPARKS3lica0.1140.9270.635threading_7AQESSHSASRLQFLLEHAQANTQGLSDFIGLLADKDDINNPEKRNPDFFGSAIAFKPNTFPN---KKLFSPYVYSGSGFNYLDIGADGAINQVGGYWSKAITYAVPGVQPDYFGVTTVDLALDRPEQLGIAPSRLVVLDDQGRLIFKEKVLAGWLDKQNIKAFATLLNDGQA---GQASFVDDKGTVYLASVAEVARVVVVHELFASL----------
8PROSPECT22r55A0.0690.7940.990threading_8F----QSMAAQMSEAVAEKMLQYRR---------DTAGWKICREGNGVSVSWRPSVEFPGNLYRGEG-----IVYGTLEEVWDCVKPGGLRVKWDENVTGFEIIQSITDT----LCVSRTSTPS------------AAMKLISPRDFVDLVLVKRYEDGTI-----------SSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPPTKTNLVTFFHE
9PPA-I3lifA0.0740.9310.915threading_9SETERNLSHSLAEHATHTFQGADVVLDDIVSFKWRPHPSPVFNNLPQLSDVAIL---DADGQLTYASVKPVPALDNSDRSYFRYHRANDDHTLLITGPIQVSRRLETTDGKFFGVVVATIESEYFSTFYKTFDLGSLLHSDGRLLIQWPSLQTGRDANVLFQKALPRSPDG----YYLTVSPFDGL--------TKYLAYRRVSRYPLVVTVARTEDS
10HHPRED-l1fft_B0.1030.6650.995threading_10-------------------------SAAVGFRASNKDAKYSHNKVEAVVFLATALEDEKPITIEVVSMDWKWFFIYPEQATVNEIA-FPANTPYFKVTNSVRLHLIANEGTYDGIMKFKAIPDRAAFDQKAKQSPNTMSDMAAFAAPSEYNQVEYFSNPDLFADVINKFMA-----------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.621 to 1kb9E
SCOP code=b.33.1.1
TM-score=0.314 to 1tuuA
SCOP code=c.55.1.2
TM-score=0.734 to 1jssA
SCOP code=d.129.3.2
TM-score=0.387 to 1xvxA
SCOP code=c.94.1.1
TM-score=0.352 to 2v45A
SCOP code=b.52.2.2