Template-based Modeling Results for YIGB_ECOLI

Submitted Primary Sequence

>Length 238
MRFYRPLGRISALTFDLDDTLYDNRPVILRTEREALTFVQNYHPALRSFQNEDLQRLRQAVREAEPEIYHDVTRWRFRSIEQAMLDAGLSAEEASAGAHAAMINFAKWRSRIDVPQQTHDTLKQLAKKWPLVAITNGNAQPELFGLGDYFEFVLRAGPHGRSKPFSDMYFLAAEKLNVPIGEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTWDSRLLPHLEISRLASLTSLI
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRFYRPLGRISALTFDLDDTLYDNRPVILRTEREALTFVQNYHPALRSFQNEDLQRLRQAVREAEPEIYHDVTRWRFRSIEQAMLDAGLSAEEASAGAHAAMINFAKWRSRIDVPQQTHDTLKQLAKKWPLVAITNGNAQPELFGLGDYFEFVLRAGPHGRSKPFSDMYFLAAEKLNVPIGEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTWDSRLLPHLEISRLASLTSLI
CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEECCHHHHHHHC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRFYRPLGRISALTFDLDDTLYDNRPVILRTEREALTFVQNYHPALRSFQNEDLQRLRQAVREAEPEIYHDVTRWRFRSIEQAMLDAGLSAEEASAGAHAAMINFAKWRSRIDVPQQTHDTLKQLAKKWPLVAITNGNAQPELFGLGDYFEFVLRAGPHGRSKPFSDMYFLAAEKLNVPIGEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTWDSRLLPHLEISRLASLTSLI
5422221240100000011000112210120122002102322211311122002201210231123012201211020012002302122310110021012101202221311330130032015301000002021102211013101000001322322111300110043040212000000110110000014000100001132232232232422120202302201311
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRFYRPLGRISALTFDLDDTLYDNRPVILRTEREALTFVQNYHPALRSFQNEDLQRLRQAVREAEPEIYHDVTRWRFRSIEQAMLDAGLSAEEASAGAHAAMINFAKWRSRIDVPQQTHDTLKQLAKKWPLVAITNGNAQPELFGLGDYFEFVLRAGPHGRSKPFSDMYFLAAEKLNVPIGEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTWDSRLLPHLEISRLASLTSLI
1	MUSTER	2w4mA	0.222	0.983	2.221	threading_1	LYFQSGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHY-KEEAEIICDKVQVKLSKEFHPYNTCITDLRTSHWEEAIQETKGGAANRKLAEECYFLWKSTRLQHMTLAEDVKAMLTELRKEVRLLLLTNGDEKIEACACQSYFDAVVVGGEQREEKPAPSIFYYCCNLLGVQPGDCVMVGDTLETDIQGGLNAGLATVWINKNG---IVPLKSSPVPHYMVSSVLELPALL
2	SPARKS	3qnma	0.199	0.929	3.353	threading_2	-------LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQAVGVED---EALAERFSEDFFAIIPTKSGLPHAKEVLEYLAPQYNLYILSNGFSRKRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRE-SLIGDSWEADITGAHGVGHQAFYNVTER------TVFPFQPTYHIHSLKELNLLE
3	PROSPECT2	2gfhA	0.234	0.971	3.663	threading_3	-HHHMGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKE----EAEIICDKVQVKLSKECFHCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKEVRLLLLTNGDRQIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGR--VPLTSSPMPHYMVSSVLELPALL
4	PPA-I	3qnmA	0.199	0.929	2.481	threading_4	-------LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQAVGVED---EALAERFSEDFFAIIPTKSGLPHAKEVLEYLAPQYNLYILSNGFRELQSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRE-SLIGDSWEADITGAHGVGHQAFYNVTER------TVFPFQPTYHIHSLKELNLLE
5	HHPRED-l	2gfh_A	0.231	0.962	2.180	threading_5	-HHHMGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFH----CITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKEVRLLLLTNGDRQIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKAVWINKSGRVP---LTSSPMPHYMVSSVLELPAL-
6	HHPRED-g	2gfh_A	0.227	0.962	2.103	threading_6	-HHHMGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYK-EEAEIICDKVQVKLSKCFH----CITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKEVRLLLLTNGDRQTEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKAVWINKSGRV---PLTSSPMPHYMVSSVLELPALL
7	SP3	3qnma	0.199	0.929	3.475	threading_7	-------LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQAVGVED---EALAERFSEDFFAIIPTKSGLPHAKEVLEYLAPQYNLYILSNGFSRKRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRE-SLIGDSWEADITGAHGVGHQAFYNVTER------TVFPFQPTYHIHSLKELNLLE
8	SAM-T99	2hoqA	0.245	0.908	3.438	threading_8	M--------VKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLVDFETAYSELIELIKEYGSNFPYH-----------FDYLLRRLDLPYN--PKWISAGVIAYHNTKFALREVPGARKVLIRLKELYELGIITDGNPKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWF-RYGKHSERELEYRKYADYEIDNLESLLEVL
9	MUSTER	3qnmA	0.199	0.929	2.199	threading_9	-------LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQAVGVED---EALAERFSEDFFAIIPTKSGLPHAKEVLEYLAPQYNLYILSNGFRELQSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRE-SLIGDSWEADITGAHGVGHQAFYNVTER------TVFPFQPTYHIHSLKELNLLE
10	SPARKS	2gfha	0.217	0.966	2.993	threading_10	-HHHMGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHY-KEEAEIICDKVQVKLSKECFH---CITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKEVRLLLLTNGDEKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKTVWINKSGR---VPLTSSPMPHYMVSSVLELPALL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.758 to 1x42A SCOP code=c.108.1.1	TM-score=0.766 to 1x42A SCOP code=c.108.1.1	TM-score=0.817 to 1x42A SCOP code=c.108.1.1	TM-score=0.788 to 1x42A SCOP code=c.108.1.1	TM-score=0.815 to 1x42A SCOP code=c.108.1.1