Template-based Modeling Results for YIHP_ECOLI

Submitted Primary Sequence

>Length 461
MSHITTEDPATLRLPFKEKLSYGIGDLASNILLDIGTLYLLKFYTDVLGLPGTYGGIIFLISKFFTAFTDMGTGIMLDSRRKIGPKGKFRPFILYASFPVTLLAIANFVGTPFDVTGKTVMATILFMLYGLFFSMMNCSYGAMVPAITKNPNERASLAAWRQGGATLGLLLCTVGFVPVMNLIEGNQQLGYIFAATLFSLFGLLFMWICYSGVKERYVETQPANPAQKPGLLQSFRAIAGNRPLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDPILLSYMGFFSMGCIFIGVFLMPASVRRFGKKKVYIGGLLIWVLGDLLNYFFGGGSVSFVAFSCLAFFGSAFVNSLNWALVSDTVEYGEWRTGVRSEGTVYTGFTFFRKVSQALAGFFPGWMLTQIGYVPNVAQADHTIEGLRQLIFIYPSALAVVTIVAMGCFYSLNEKMYVRIVEEIEARKRTA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSHITTEDPATLRLPFKEKLSYGIGDLASNILLDIGTLYLLKFYTDVLGLPGTYGGIIFLISKFFTAFTDMGTGIMLDSRRKIGPKGKFRPFILYASFPVTLLAIANFVGTPFDVTGKTVMATILFMLYGLFFSMMNCSYGAMVPAITKNPNERASLAAWRQGGATLGLLLCTVGFVPVMNLIEGNQQLGYIFAATLFSLFGLLFMWICYSGVKERYVETQPANPAQKPGLLQSFRAIAGNRPLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDPILLSYMGFFSMGCIFIGVFLMPASVRRFGKKKVYIGGLLIWVLGDLLNYFFGGGSVSFVAFSCLAFFGSAFVNSLNWALVSDTVEYGEWRTGVRSEGTVYTGFTFFRKVSQALAGFFPGWMLTQIGYVPNVAQADHTIEGLRQLIFIYPSALAVVTIVAMGCFYSLNEKMYVRIVEEIEARKRTA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSHITTEDPATLRLPFKEKLSYGIGDLASNILLDIGTLYLLKFYTDVLGLPGTYGGIIFLISKFFTAFTDMGTGIMLDSRRKIGPKGKFRPFILYASFPVTLLAIANFVGTPFDVTGKTVMATILFMLYGLFFSMMNCSYGAMVPAITKNPNERASLAAWRQGGATLGLLLCTVGFVPVMNLIEGNQQLGYIFAATLFSLFGLLFMWICYSGVKERYVETQPANPAQKPGLLQSFRAIAGNRPLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDPILLSYMGFFSMGCIFIGVFLMPASVRRFGKKKVYIGGLLIWVLGDLLNYFFGGGSVSFVAFSCLAFFGSAFVNSLNWALVSDTVEYGEWRTGVRSEGTVYTGFTFFRKVSQALAGFFPGWMLTQIGYVPNVAQADHTIEGLRQLIFIYPSALAVVTIVAMGCFYSLNEKMYVRIVEEIEARKRTA
54423233322240311110000001000000000000000100010010100000000000100100001000100112232133131200100000000000000000121321010000000000000000000000000002013223111100001200000010000000000021122222100100000000000000000010122222323323223411012002101112200000000000000000100000000110021220000000000001000000011003212312000000000000000010012000000000000000000000000000010121111211231200000000001100100000000000100011332221330020021000000000000000000010303330022003203234445
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSHITTEDPATLRLPFKEKLSYGIGDLASNILLDIGTLYLLKFYTDVLGLPGTYGGIIFLISKFFTAFTDMGTGIMLDSRRKIGPKGKFRPFILYASFPVTLLAIANFVGTPFDVTGKTVMATILFMLYGLFFSMMNCSYGAMVPAITKNPNERASLAAWRQGGATLGLLLCTVGFVPVMNLIEGNQQLGYIFAATLFSLFGLLFMWICYSGVKERYVETQPANPAQKPGLLQSFRAIAGNRPLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDPILLSYMGFFSMGCIFIGVFLMPASVRRFGKKKVYIGGLLIWVLGDLLNYFFGGGSVSFVAFSCLAFFGSAFVNSLNWALVSDTVEYGEWRTGVRSEGTVYTGFTFFRKVSQALAGFFPGWMLTQIGYVPNVAQADHTIEGLRQLIFIYPSALAVVTIVAMGCFYSLNEKMYVRIVEEIEARKRTA
1	MUSTER	1pv6A	0.125	0.887	1.446	threading_1	MYYLKN----------TNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKL------GLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGIYLGFCFNAGAPAVEAFIEKVSRRSN-----FGRARMFGCVGWALGASIVGIMFTI----NNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFA-TSALEVVILKTLHMFEVPFLLVGCFKYITSQFE-------VRFSATIYLVCFCFKQLAMIFMSVLAGNMYESIG-----------FQGAYLVLGLVALGFTLISVFTLSGPGPLS--LLRRQVNEVA------
2	SPARKS	1pw4a	0.127	0.907	2.590	threading_2	-FKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLFALAMPYLGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNP-------RVFLPAGLILAAAVMLFMGFVPWATSS--IAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWH-----AALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKFRGNRGATGVFFMTLVTIATIVYWAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAAAIVGYTVDFFGWD----------GGFMVMIGGSILAVILLIVVMIGEK----RRHEQLLQELVP------
3	PROSPECT2	1pw4A	0.134	0.905	2.444	threading_3	FKPAPHKARLPAAEIDPT-----YRRLRWQIFLGIFFGYAAYYLVRKQGFSRGDLGFALSGISIAYGFSKFIMGSVSD---------RSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWH--AALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAASAVGYTVDFFGW----------DGGFMVMIGGSILAVILLIVVM----------IGEKRRHEQLLQELVP
4	PPA-I	1pw4A	0.123	0.915	1.673	threading_4	-FKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNP-------RVFLPAGLILAAAVMLFMGFVPW--ATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAA--LYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVGNRGATGVFFMTLVTIATIVYWMAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF------FGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP-------------
5	HHPRED-l	3o7q_A	0.129	0.839	5.031	threading_5	------------RSYIIPFALLCSLFFLWAVANNLNDILLP-QFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKK------LSYKAG-IITGLFLYALGAALFAEIMN------YTLFLVGLFIIAAGLGCLETAANPFVTVLGPE-SSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHLVLSVQTPYMIIVAIVLLVALLIMLKFPALQSDN--HSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIGTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAG-GHVGL-IALTLCSAFMSIQYPTIFSLGIKNLGQD--------TKYGSSFIV-MTIIGGGIVTPVMGFVSDAGNIPTA---------------ELIPALCFAVIFIFARFRSQ-T------------------
6	HHPRED-g	3o7q_A	0.129	0.839	4.536	threading_6	------------RSYIIPFALLCSLFFLWAVANNLNDILL-PQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMK------KLSY-KAGIITGLFLYALGAALFAEIMN------YTLFLVGLFIIAAGLGCLETAANPFVTVLG-PESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHLVLSVQTPYMIIVAIVLLVALLIMTKFPALQSD--NHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIGTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGG-HVGL-IALTLCSAFMSIQYPTIFSLGIKNLG-------QD-TKYGSSFI-VMTIIGGGIVTPVMGFVSDAGNIPT---------------AELIPALCFAVIFIFARFRSQT-------------------
7	SP3	1pw4a	0.105	0.907	2.441	threading_7	HKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVNFALAMPYLVE-QGFSRGDLGFALSGISIAYGFSKFIMGSVSD------RSNPRV-FLPAGLILAAAVMLFMGFVPWATSS--IAVMFVLLFLCGWFQGMGWPPCGRTMVHWW-SQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFND-----WHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAAAIVGYTVDFFGWD---------------GGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP-----
8	SAM-T99	1pw4A	0.108	0.822	0.985	threading_8	------------AMPYLVEQGFSRGDLGFALSGISIAY----------------------------GFSKFIMGSVSDRSNP-------RVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWF----GMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHA--ALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYPGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGFGYLGGSVAASAIVGYTVDFFGWDGGF---------MVMIGGSILAVILLIVVMIG------EKRRHEQLLQEL-------
9	MUSTER	1pw4A	0.127	0.887	1.418	threading_9	HKARLPAAEIDPTYRLGIFFGYAAYYLVRK-NFALAMPYLV------QGFSRGDLGFALSGISIAYGFSKFIMGSVSD------RSN--RVFLPAGLILAAAVMLFMGFVPWATSS--IAVMFVLLFLCGWFQGMGWPPCGRTMVH---SQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFND-----WHAALYMPAFCAILVALFAFAMMRQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVGNRGATGVFFMTLVTIATIVYWMNGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFG-----------WDGGFMVMIGGSILAVILLIVVMIGE----KRRHEQLLQELVP-----
10	SPARKS	1pv6a	0.142	0.887	2.485	threading_10	----------MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRK--------YLLWIITGMLVMFAPFFIFIFGPLLQLVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSN--FEFGRARMFG-CVGWALGASIVGIMFTI---NNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFS-LKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFA-TSALEVVILKTLHMFEVPFLLVGCFKYITSQFE-------VRFSATIYLVFCFFKQLAMIFMSVLAGNMYESIGF-------QGAY---------LVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA---

Predicted Tertiary Structure


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TM-score=0.929 to 1pv6A SCOP code=f.38.1.2	TM-score=0.901 to 1pw4A SCOP code=f.38.1.1	TM-score=0.889 to 1pw4A SCOP code=f.38.1.1	TM-score=0.879 to 1pw4A SCOP code=f.38.1.1	TM-score=0.895 to 1pw4A SCOP code=f.38.1.1