Template-based Modeling Results for YIJF_ECOLI

Submitted Primary Sequence

>Length 205
MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYFVK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYFVK
CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCEECCCCCCHHHCCCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYFVK
4311110111000112312423212220121223212100200132022212121200101012111243300001000200243411012001200231033003314133112201132020020002323221212322221210000002022111000000112144210000000021121210012030101000226
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYFVK
1	PROSPECT2	1utea	0.079	0.932	1.218	threading_1	TAREMANAKAIATTVFTGVHDAKDKRFQETFEDVFSDPSLQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVLDTVTLCGNSDDFVSQQLARTQLAWIKKQLAAAKEDYVWSIAEHGPTHCLVKQLLPLLTTHKFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVE-ITPKEMSVTYIEASGKS-------------LFKTKLP
2	HHPRED-l	2jyx_A	0.218	0.580	1.359	threading_2	------------------------------MNVDVKSRIMDQYADWKGV--RYR--------LGGSTK--KGICSGFVQRTFRQFGLELPR------------STYE---------------------QQEMGKSV----SRSNLRTGDLVLFRAGSTGRHVGIYIG----NN--QFVHASTSGVIISSMNEPWRYNEARRVLS-
3	HHPRED-g	2jyx_A	0.217	0.585	1.735	threading_3	------------------------------MNVDVKSRIMDQYADWKGVR--YR--------LGGSTK--KGICSGFVQRTFRQFGLELPR------------STYE---------------------QQEMGKSV----SRSNLRTGDLVLFRAGSTGRHVGIYIG----NN--QFVHASTSGVIISSMNEPWRYNEARRVLSR
4	PROSPECT2	1us4A	0.114	0.941	1.131	threading_4	GVYFPVATGIAKLVNDANVGSTGGSVANINAEALAQNDIAYYAYQGCCIPAFEGKPVKTIRALAALVGDVGSGTEQNARQILEAYGLTFDDL------GQAIRVSASQGIQLQDKRADALGASAIQQLALTTPIALVAVDLNRIQAIAK------KYPFYVGFNIPGGTYKVTTPTVAVQALERLSEETVYKFKAVFGNLEAFKK
5	HHPRED-l	3npf_A	0.156	0.717	1.358	threading_5	TP-SKERYDEWVDGRKAYLSKSISQPGWRASLKQDVESIIETAYS--GIP--Y--------LWAGTSSK-GVD-SGLVRTVLF-HDIIIPRDASQ-----------Q----------------------AYVGEHIDIAPDFSNVKRGDLVFFGRKEGISHVGIYLG----N--KQFIHALG-DVHVSS-NPANRLLFAVRFLP-
6	HHPRED-g	3ne0_A	0.149	0.751	1.452	threading_6	ATSAQVTANMGRKFLEPTDTGNAPIPRVY--GRQASEYVIRRGMSQIGV--PYSWGGGNAGIDSG--AGTVGDCSGLVLYSFAGVGIKLPHYSG-----------------------------SQ---Y-NLGRKI----PSSQMRRGDVIFYGP-NGSQHVTIYLG----NG--QMLEAPDVGVRVAP-VRTAGMTPYVVRYIE
7	PROSPECT2	1wdhA	0.100	0.927	1.052	threading_7	LFVKDILFPYIEENVKEYLQTHWEEEECQQ--------DVSLLRKQAEEDAHLDGA---VPIPAASGNGVDDLQQIQAVVDNVCWQSLDKTTALKQLQGHWRAAFTAGRKAEFFADV----VPAVRKWREAGKVYIYSSGSVEAQKLVDGHFDTKIGHKVEILFLTDVEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSELYL
8	HHPRED-l	3ne0_A	0.157	0.746	1.158	threading_8	ANMRKFLEQLGILQPTDTGITNARIPRVYG--RQASEYVIRRGMSQIGV--PYSWGGGNAGIDSGA--GTVGDCSGLVLYSFAGVGIKLPHYSG-----------------------------SQ---Y-NLGRKI----PSSQMRRGDVIFYG-PNGSQHVTIYLG----NG--QMLEAPDVGVRVAP-VRTAGMTPYVVRYI-
9	HHPRED-g	3npf_A	0.161	0.698	1.449	threading_9	YQVSYP------DGRKAYLSKSISQPGWRASLKQDVESIIETAYS--GIP------Y----LWAGTSSK-GVD-SGLVRTVLF-HDIIIPRDAS--------------Q-------------------QAYVGEHIDIAPDFSNVKRGDLVFFGRKEGISHVGIYLG------NKQFIHALG-DVHVSS-NPANRLLFAVRFLPY
10	PROSPECT2	3tmpC	0.093	0.785	1.027	threading_10	HMGA----------GYNEDEYEAAAARIEAMDPATVEQQEHWFEKALRDKK----GFIIKQMKED------GACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTED---------FTTYINRKRKNNCHGNHIAEMYNRPVEVYQYSTGTSAVEPINTFHGIDEPIRVSYHRN---------------IHYNSVVN

Predicted Tertiary Structure


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TM-score=0.483 to 1fyeA SCOP code=c.23.16.4	TM-score=0.491 to 2iobB SCOP code=c.30.1.7	TM-score=0.503 to 2iobB SCOP code=c.30.1.7	TM-score=0.682 to 1us4A SCOP code=c.94.1.1	TM-score=0.509 to 2im9A SCOP code=d.3.1.13