Template-based Modeling Results for YJHG_ECOLI


  Submitted Primary Sequence

>Length 655
MSVRNIFADESHDIYTVRTHADGPDGELPLTAEMLINRPSGDLFGMTMNAGMGWSPDELDRDGILLLSTLGGLRGADGKPVALALHQGHYELDIQMKAAAEVIKANHALPYAVYVSDPCDGRTQGTTGMFDSLPYRNDASMVMRRLIRSLPDAKAVIGVASCDKGLPATMMALAAQHNIATVLVPGGATLPAKDGEDNGKVQTIGARFANGELSLQDARRAGCKACASSGGGCQFLGTAGTSQVVAEGLGLAIPHSALAPSGEPVWREIARASARAALNLSQKGITTREILTDKAIENAMTVHAAFGGSTNLLLHIPAIAHQAGCHIPTVDDWIRINKRVPRLVSVLPNGPVYHPTVNAFMAGGVPEVMLHLRSLGLLHEDVMTVTGSTLKENLDWWEHSERRQRFKQLLLDQEQINADEVIMSPQQAKARGLTSTITFPVGNIAPEGSVIKSTAIDPSMIDEQGIYYHKGVAKVYLSEKSAIYDIKHDKIKAGDILVIIGVGPSGTGMEETYQVTSALKHLSYGKHVSLITDARFSGVSTGACIGHVGPEALAGGPIGKLRTGDLIEIKIDCRELHGEVNFLGTRSDEQLPSQEEATAILNARPSHQDLLPDPELPDDTRLWAMLQAVSGGTWTGCIYDVNKIGAALRDFMNKN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSVRNIFADESHDIYTVRTHADGPDGELPLTAEMLINRPSGDLFGMTMNAGMGWSPDELDRDGILLLSTLGGLRGADGKPVALALHQGHYELDIQMKAAAEVIKANHALPYAVYVSDPCDGRTQGTTGMFDSLPYRNDASMVMRRLIRSLPDAKAVIGVASCDKGLPATMMALAAQHNIATVLVPGGATLPAKDGEDNGKVQTIGARFANGELSLQDARRAGCKACASSGGGCQFLGTAGTSQVVAEGLGLAIPHSALAPSGEPVWREIARASARAALNLSQKGITTREILTDKAIENAMTVHAAFGGSTNLLLHIPAIAHQAGCHIPTVDDWIRINKRVPRLVSVLPNGPVYHPTVNAFMAGGVPEVMLHLRSLGLLHEDVMTVTGSTLKENLDWWEHSERRQRFKQLLLDQEQINADEVIMSPQQAKARGLTSTITFPVGNIAPEGSVIKSTAIDPSMIDEQGIYYHKGVAKVYLSEKSAIYDIKHDKIKAGDILVIIGVGPSGTGMEETYQVTSALKHLSYGKHVSLITDARFSGVSTGACIGHVGPEALAGGPIGKLRTGDLIEIKIDCRELHGEVNFLGTRSDEQLPSQEEATAILNARPSHQDLLPDPELPDDTRLWAMLQAVSGGTWTGCIYDVNKIGAALRDFMNKN
CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEECHHHHCCCCEEEECCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSVRNIFADESHDIYTVRTHADGPDGELPLTAEMLINRPSGDLFGMTMNAGMGWSPDELDRDGILLLSTLGGLRGADGKPVALALHQGHYELDIQMKAAAEVIKANHALPYAVYVSDPCDGRTQGTTGMFDSLPYRNDASMVMRRLIRSLPDAKAVIGVASCDKGLPATMMALAAQHNIATVLVPGGATLPAKDGEDNGKVQTIGARFANGELSLQDARRAGCKACASSGGGCQFLGTAGTSQVVAEGLGLAIPHSALAPSGEPVWREIARASARAALNLSQKGITTREILTDKAIENAMTVHAAFGGSTNLLLHIPAIAHQAGCHIPTVDDWIRINKRVPRLVSVLPNGPVYHPTVNAFMAGGVPEVMLHLRSLGLLHEDVMTVTGSTLKENLDWWEHSERRQRFKQLLLDQEQINADEVIMSPQQAKARGLTSTITFPVGNIAPEGSVIKSTAIDPSMIDEQGIYYHKGVAKVYLSEKSAIYDIKHDKIKAGDILVIIGVGPSGTGMEETYQVTSALKHLSYGKHVSLITDARFSGVSTGACIGHVGPEALAGGPIGKLRTGDLIEIKIDCRELHGEVNFLGTRSDEQLPSQEEATAILNARPSHQDLLPDPELPDDTRLWAMLQAVSGGTWTGCIYDVNKIGAALRDFMNKN
5544222233232012032323233131212231123222121000000100112233142100000000012211312101111131122032003000210331311000000010010102012001000000200000021002000301000000100300000000000101000000000012113323321202100010232312231032001300010100020000000000001001000120010111122022102201200120023102022000130010000000011001000000000014030301103001201430110010112032111000003001001001102211001320000111103200221332332341332123333132331001132131322210000010100220000101102221123321110201010121131002003333032100000002013121021002000002312213200000112012112000000000101330100102300102010321201010232223133102101321222323223332223232231120010011000022210111032002103322444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSVRNIFADESHDIYTVRTHADGPDGELPLTAEMLINRPSGDLFGMTMNAGMGWSPDELDRDGILLLSTLGGLRGADGKPVALALHQGHYELDIQMKAAAEVIKANHALPYAVYVSDPCDGRTQGTTGMFDSLPYRNDASMVMRRLIRSLPDAKAVIGVASCDKGLPATMMALAAQHNIATVLVPGGATLPAKDGEDNGKVQTIGARFANGELSLQDARRAGCKACASSGGGCQFLGTAGTSQVVAEGLGLAIPHSALAPSGEPVWREIARASARAALNLSQKGITTREILTDKAIENAMTVHAAFGGSTNLLLHIPAIAHQAGCHIPTVDDWIRINKRVPRLVSVLPNGPVYHPTVNAFMAGGVPEVMLHLRSLGLLHEDVMTVTGSTLKENLDWWEHSERRQRFKQLLLDQEQINADEVIMSPQQAKARGLTSTITFPVGNIAPEGSVIKSTAIDPSMIDEQGIYYHKGVAKVYLSEKSAIYDIKHDKIKAGDILVIIGVGPSGTGMEETYQVTSALKHLSYGKHVSLITDARFSGVSTGACIGHVGPEALAGGPIGKLRTGDLIEIKIDCRELHGEVNFLGTRSDEQLPSQEEATAILNARPSHQDLLPDPELPDDTRLWAMLQAVSGGTWTGCIYDVNKIGAALRDFMNKN
1MUSTER2gp4A0.2490.7662.989threading_1--------------------------------------------------------------HHSVVQSVTDRIIARSK-------SREAYLAALNDARNHLLKEVGSVAQVAGV--PCDGVTQGQPGE-LSLLSREVIAATAVGLS----NFDGALLLGICDKIVPGLLIGALS-FGHLPLFVPAGP----------------------GKVDRAQLLEAEAQSYHSA-GTCT--FYGQLL-----EVGLQLPGSSFVNPDDPLREALNKAAKQVCRELGTQYSPIGEVVNEKSIVNGIVALLATGGSTN-LTHIVAAARAAGIIV-NWDDFSELSDAVPLLARVYPNGH--ADINHFHAAGG-AFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELR---WVDGPTVSLDTEVLTSVATPFQN--NGGLKLLKGNLG--RAVIKVSAVQPQHR------VVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKGPELHKLTPLLGSLQDKGFK---VALTDGRSGASGKVPAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLV------SDTELATRTATEIDLRHSRYGG-----------RELFGVLRSNLSSPETGARST-----SAIDELY---
2SPARKS2gp4a0.2370.7664.005threading_2--------------------------------------------------------------HHSVVQSVTDRIIAR------SKASREAYLAALNDARNHLLKQEGSVAQVAGVPC--DGVTQGQPGE-LSLLSREVIAATAVGL--SHN-FDGALLLGICDKIVPGLLIGAL-SFGHLPLFVPAGPG----------------------KVDRAQLLEAEAQSYHSA-GTC--TFYGQLLE-----VGLQLPGSSFVNPDDPLREALNAKQVCRLTELGTQYSPIGEVVNEKSIVNGIVALLATGGSTNL-THIVAAARAAGIIV-NWDDFSELSDAVPLLARVYPNGH--ADINHFHAAGGA-FLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDG---ELRWVDGPTVSLDTEVLTSVATPFQ--NNGGLKLLKGNLG--RAVIKVSAVQPQHR------VVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKGPELHKLTPLLGSLQDKGFK---VALTDGRSGASGKVPAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLV------SDTELATRTATEIDLRHSRYGG-----------RELFGVLRSNLSSPETGARSTIDELY----------
3PROSPECT22gp4A0.2360.7714.171threading_3----------HHSVVQ-------------------------SVTDRIIARSKASREAYLA--------------------------ALNDARNHLLKQEVGSVAQVAGVP--------CDGVTQGQPGE-LSLLSREVIAATAVGL---SHNFDGALLLGICDKIVPGLLIG-ALSFGHLPLFVPAGP----------------------GKVDRAQLLEAEAQSYHSA--------GTCTFYGQLLEVGLQLPGSSFVNPDDPLREALNAKQVCRLTELGTQYSPIGEVVNEKSIVNGIVALLATGGSTN-LTHIVAAARAAGIIV-NWDDFSELSDAVPLLARVYPNGHAD--INHFHAAGGAF-LIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELRWVD---GPTVSLDTEVLTSVATPFQN--NGGLKLLKGNLGR--AVIKVSAVQPQHR------VVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKGPELHKLTPLLGSLQDKGFK---VALTDGRSGASGKVPAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLV------SDTELATRTATEID-----------LRHSRYGGRELFGVLRSNLSSPETGARST--------SAIDELY
4PPA-I2gp4A0.2380.7699.670threading_4--------------------------------------------------------------HHSVVQSVTDRIIARSKA------SREAYLAALNDARNHLLQEVGSVAQVAGV--PCDGVTQGQPGE-LSLLSREVIAATAVGLSH---NFDGALLLGICDKIVPGLLIGALS-FGHLPLFVPAGPG----------------------KVDRAQLLEAEAQSYHSA--------GTCTFYGQLLEVGLQLPGSSFVNPDDPLREALNKAAKQVCRELGTQYSPIGEVVNEKSIVNGIVALLATGGSTN-LTHIVAAARAAGIIV-NWDDFSELSDAVPLLARVYPNGHAD--INHFHAAGG-AFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDG---ELRWVDGPTVSLDTEVLTSVATPFQ--NNGGLKLLKGNLG--RAVIKVSAVQ------PQHRVVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKGPELHKLTPLLGSLQDKGFK---VALTDGRSGASGKVPAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLV------SDTELATRTATEIDLRHSRYGGREL-----------FGVLRSNLSSPETGARST-----SAIDELY---
5HHPRED-l2gp4_A0.2570.7609.701threading_5---HSVVQSVTDRIIAR--SKASREAYLAALNDARNH------------------------------------------------------------LLK---QEVGSVAQVAG-V--CDGVTQGQPG-ELSLLSREVIA-ATAVGLSHN--FDGALLLGICDKIVPGLLIG-ALSFHLP-LFVPAGP----------------------GKVDRAQLLEAEAQSYHSA-GTCTFYG--------LEV-GLQLPGSSFVNPDDPLREALNK-AAKQVCRLTEQYSPIGEVVNEKSIVNGIVALLATGGSTNLT-HIVAAARAAGIIV-NWDDFSELSDAVPLLARVYPNGH--ADINHFHAAGG-AFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELRWVDGPT---VSLDTEVLTSVATPFQN--NGGLKLLKGNLGR--AVIKVSAVQPQH------RVVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKANG-PELHKLTPLLGSQDKGFKVAL-TDGR-SGASGKVAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLVS----------------DTELATRTAT-EIDLRHSRG-GRELFGVLRSNLSSPETGARSTSAI-----DELY---
6HHPRED-g2gp4_A0.2740.7193.388threading_6-----------------------------HSREAYL-------------------------------------------------------------LLK---QEVGSVAQVAG-V--CDGVTQGQPG-ELSLLSREVIA-ATAVGLSHN--FDGALLLGICDKIVPGLLIG-ALSFHLP-LFVPAGP----------------------GKVDRAQLLEAEAQSYHSA-GTCTFYG--------LEV-GLQLPGSSFVNPDDPLREALNK-AAKQVCRLTEQYSPIGEVVNEKSIVNGIVALLATGGSTNLT-HIVAAARAAGIIV-NWDDFSELSDAVPLLARVYPNG-HAD-INHFHAAGG-AFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDG----ELRWVDPTVSLDTEVLTSVATPFQNN--GGLKLLKGNLGR--AVIKVSAVQPQHR------VVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKANG-PELHKLTPLLGSQDKGFKVAL-TDGR-SGASGKVAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLV------SDTELATRTA-----TEI-------DLRHSRY-RELFGVLRSNLSSPETGARSTS-AIDEL---Y----
7SP32gp4a0.2410.7681.582threading_7--------------------------------------------------------------HHSVVQSVTDRIIA------RSKASREAYLAALNDARNHLLKEVGSVAQVAGVP--CDGVTQGQPGE-LSLLSREVIAATAVGL--SHN-FDGALLLGICDKIVPGLLIGAL-SFGHLPLFVPAGPG----------------------KVDRAQLLEAEAQSYHSA-GTC--TFYGQLLE-----VGLQLPGSSFVNPDDPLREALNKAAKQVCTELGTQYSPIGEVVNEKSIVNGIVALLATGGSTNL-THIVAAARAAGIIV-NWDDFSELSDAVPLLARVYPNGHAD--INHFHAAGGA-FLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLL----DGELRWDGPTVSLDTEVLTSVATPFQ--NNGGLKLLKGNLG--RAVIKVSAVQPQHR------VVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKGPELHKLTPLLGSLQDKGFK---VALTDGRSGASGKVPAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLV------SDTELATRTATEIDLRHSRYGG-----------RELFGVLRSNLSSPETGARSTS--------AIDELY
8SAM-T992gp4A0.2470.7548.360threading_8------------------------------QSVTDRIIARSKASREAYLAALNDARNHLLKQEVGSVAQVA--------------------------------------------GVPCDGVTQGQPG-ELSLLSREVIAAT--AVGL-SHNFDGALLLGICDKIVPGLLIGAL-SFGHLPLFVPAGP----------------------GKVDRAQLLEAEAQSYHS-AGTCTFYG------QLLEV-GLQLPGSSFVNPDDPLREAL-NKAAKQVCRLTELGTQYSPIVNEKSIVNGIVALLATGGSTNLT-HIVAAARAAGIIV-NWDDFSELSDAVPLLARVYPNGH--ADINHFHAAGGAFLI-KELLDAGLLHEDVNTVAGYGLRRYTQEPK---LLDGELRWVDGPTVSLDTEVLTS--VATPFQNNGGLKLLKGNLGR--AVIKVSAVQPQHR------VVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKANG-PELHKLTPLLGSLQDKGFKVALTDGRSGASGKVPAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLVSDTELATRTATEIDLRHS-----------------RYGGRELFGVLRSNLSSPETGARST---------------
9MUSTER2gp4A10.2410.5251.713threading_9--------------------------------------------------------------HHSVVQSVTDRIIARSK-------SREAYLAALNDARNHLLKEVGSVAQVAGVP--CDGVTQGQPGE-LSLLSREVIAATAVGLS----NFDGALLLGICDKIVPGLLIGALS-FGHLPLFVPAGP----------------------GKVDRAQLLEAEAQSYHSA-GTCT--FYGQLL-----EVGLQLPGSSFVNPDDPLREALNKAAKQVCRELGTQYSPIGEVVNEKSIVNGIVALLATGGSTN-LTHIVAAARAAGIIV-NWDDFSELSDAVPLLARVYPNGH--ADINHFHAAGG-AFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGE---LRWVDGPTVSLDTEVLTSVATPFQN--NGDLGVLRSNLSSPETGARSTSAIDELY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10SPARKS2p1mb0.0800.8060.670threading_10-PEESFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPATVIRRFPKVRS--------VELKGKPHFADFNLVPDGWGGYV-----YPWIEAMSSSYTWLEEIRLKRMVVT----------------------DDCLELIAKSFKNFK-VLVLSSCEGFSTDGLAAIAATCNLKELDLRESDVDDVHFPDTYTSLVSLNISCLASEVSFSALERLVTR-CPNKLNRAV---PLEKLATLLQ----RAPQGGYTAEVRPDVYSGLSVALSGCKELRCWDAVPAYLPAVYSVCSRLTLNLSATVQSYDLVKLLCQCPKLQRDYIEDAGLEVLASTCKDLLRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKD--LRRLSGLLTDKVFE-----YIGTYAKKMEMLSVAFA----GDSDLGMHHVLSGSLRK---LEIRDCPFGDKALLANASKLETMRSLWMS-------------SCS------VSFGACK----LLGQKMPKLNVEVIDERGAPDSRPESCPVERVFIYR--TVAGPRFDMPGFVWNM-------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.848 to 2gp4A
SCOP code=c.8.2.2
TM-score=0.853 to 2gp4A
SCOP code=c.8.2.2
TM-score=0.839 to 2gp4A
SCOP code=c.8.2.2
TM-score=0.853 to 2gp4A
SCOP code=c.8.2.2
TM-score=0.845 to 2gp4A
SCOP code=c.8.2.2