Template-based Modeling Results for YKFC_ECOLI


  Submitted Primary Sequence

>Length 376
MQRKLATWAATDPSLRIQRLLRLITQPEWLAEAARITLSSKGAHTPGVDGVNKTMLQARLAVELQILRDELLSGHYQPLPARRVYIPKSNGKLRPLGIPALRDRIVQRAMLMAMEPIWESDFHTLSYGFRPERSVHHAIRTVKLQLTDCGETRGRWVIEGDLSSYFDTVHHRLLMKAVRRRISDARFMTLLWKTIKAGHIDVGLFRAASEGVPQGGVISPLLSNIMLNEFDQYLHERYLSGKARKDRWYWNNSIQRGRSTAVRENWQWKPAVAYCRYADDFVLIVKGTKAQVEAIREECRGVLEGSLKLRLNMDKTKIPHVNDGFIFLGHRLIRKRSRYGEMRVVSTIPQEKARNFAASLTALLWKVRISGEILLG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQRKLATWAATDPSLRIQRLLRLITQPEWLAEAARITLSSKGAHTPGVDGVNKTMLQARLAVELQILRDELLSGHYQPLPARRVYIPKSNGKLRPLGIPALRDRIVQRAMLMAMEPIWESDFHTLSYGFRPERSVHHAIRTVKLQLTDCGETRGRWVIEGDLSSYFDTVHHRLLMKAVRRRISDARFMTLLWKTIKAGHIDVGLFRAASEGVPQGGVISPLLSNIMLNEFDQYLHERYLSGKARKDRWYWNNSIQRGRSTAVRENWQWKPAVAYCRYADDFVLIVKGTKAQVEAIREECRGVLEGSLKLRLNMDKTKIPHVNDGFIFLGHRLIRKRSRYGEMRVVSTIPQEKARNFAASLTALLWKVRISGEILLG
CCHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCEECCCCCEEEECCCCCEECCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MQRKLATWAATDPSLRIQRLLRLITQPEWLAEAARITLSSKGAHTPGVDGVNKTMLQARLAVELQILRDELLSGHYQPLPARRVYIPKSNGKLRPLGIPALRDRIVQRAMLMAMEPIWESDFHTLSYGFRPERSVHHAIRTVKLQLTDCGETRGRWVIEGDLSSYFDTVHHRLLMKAVRRRISDARFMTLLWKTIKAGHIDVGLFRAASEGVPQGGVISPLLSNIMLNEFDQYLHERYLSGKARKDRWYWNNSIQRGRSTAVRENWQWKPAVAYCRYADDFVLIVKGTKAQVEAIREECRGVLEGSLKLRLNMDKTKIPHVNDGFIFLGHRLIRKRSRYGEMRVVSTIPQEKARNFAASLTALLWKVRISGEILLG
4233112223333222032002100213100200210142312312111112121012102210210112012232312211101012232421110211230100120001001100210022102102233102100200210012103220100010012210221203100200333122230010012013113132111121331122101000000000011002002221222424433221121023222221433232331000010010000002123210310131021002210312123330200103310100001001232422212011212333033001101200211332222125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMQRKLATWAATDPSLRIQRLLRLITQPEWLAEAARITLSSKGAHTPGVDGVNKTMLQARLAVELQILRDELLSGHYQPLPARRVYIPKSNGKLRPLGIPALRDRIVQRAMLMAMEPIWESDFHTLSYGFRPERSVHHAIRTVKLQLTDCGETRGRWVIEGDLSSYFDTVHHRLLMKAVRRRISDARFMTLLWKTIKAGHIDVGLFRAASEGVPQGGVISPLLSNIMLNEFDQYLHERYLSGKARKDRWYWNNSIQRGRSTAVRENWQWKPAVAYCRYADDFVLIVKGTKAQVEAIREECRGVLEGSLKLRLNMDKTKIPHVNDGFIFLGHRLIRKRSRYGEMRVVSTIPQEKARNFAASLTALLWKVRISGEILLG
1MUSTER3du6A0.1360.8591.050threading_1YDYDAIPWLQNVEPNLRPKLLLKHN-LFLLDNIVKPIIAF----PITLNGHEYISFESKVFHKLKKMKYLVEVQDEVKPRGVLNIIPKQDNFRAIVSIFPDSAR--KPFFKLLTSKIYKV----LEEKYKTSGSLYTCWSEFTQKT-----QGQIYGIKVDIRDAYGNVKIPVLCKLIQSHLLDSEKKNFIVDHISNQFVARRKIYKWNHGLLQGDPLSGCLCELYMAFMDRLYFS------------------------------NLDKDAFIHRTVDDYFFCSP-HPHKVYDFELLIKGVY------QVNPTKTRTNHPQDEIPYCGKIFNLTTEIRHKFKLWNFNNQISDDNPARFLQKAMDFPFICNSFTKF
2SPARKS3kyla0.1250.8722.335threading_2HKDAIPWLQNVEPNLRPKLLLKHNLFDNIVKPIIAFIKTLNGHEIKFIRKEEYISFESKVFHKLKKMKYLVEVQDEVKPRGVLNIIPKQDNFRAIVSIFP------DSARKPFFKLLTSKIYKVLEEKYKTSGSLYTCWSEFTQKT-----QGQIYGIKVDIRDAYGNVKIPVLCKLIQSHLLDSEKKNFIVDHISNQFVARRKIYKWNHGLLQGDPLSGCLCELYMAFMDRLY------------------------------FSNLDKDAFIHRTVDDYFFCSPHP-HKVYDFELLIKGV------YQVNPTKTRTRHPQDEIPYCGKIFNLTTHKFKLWNFNNQISDDNPARFLQKAMDFPFICNSFTKFEFN
3PROSPECT23du5A0.1310.8722.855threading_3MVLKNFRLCKKHKTKKILALLQEIITTTNLKRFYKVVEKLNGHEIKFIRKEEYISFESKVFHKLKKMKYLVEVQDEVKPRGVLNIIPKQDNFRAIVSIFPDSAR------KPFFKLLTSKIYKVLEEKYKTSGSLYTCWSEFTQKT-----QGQIYGIKVDIRDAYGNVKIPVLCKLIQSHLLDSEKKNFIVDHISNQFVFRRKIYKWNHGLLQGDPLSGCLCELYMAFMDRLY------------------------------FSNLDKDAFIHRTVDDYFFCS-PHPHKVYDFELLIKGV------YQVNPTKTRTNHPQDEIPYCGKIFNTLYKLPPNYEIRHKFKSSTVRAYASRAFKKIVTYKGGKRKASI
4PPA-I3du6A20.1380.6541.366threading_4------------------------------------------------RKEEYISFESKVFHKLKKMKYLVEVQDEVKPRGVLNIIPKQDNFRAIVSIFP--DSARKPFFKLLTSKIYKVLEEK----YKTSGSLYTCWSEFTQKT-----QGQIYGIKVDIRDAYGNVKIPVLCKLIQSHLLDSEKKNFIVDHISNQFVFRRKIYKWNHGLLQGDPLSGCLCELYMAFMDRLYFSNLDKDA------------------------------FIHRTVDDYFFCSPH-PHKVYDFELLIKGVYQ------VNPTKTRTRHPQDEIPYCGKIFNL---TTRQVRTL-------------------------------
5HHPRED-l3kyl_A0.1370.8546.905threading_5KNFRLCKKHKTKKPVQILALLQEIITTTNLKRFYKVVEKLTQSSCYDYNGHEIKFIREEYISFESKVFHKLKKMKYLVEKPRLNIIPKQ-DNFRAIVIFPSARKPFFKLLTSKIYKVLE-------EKYKTSGSLYTCWSEFTQK-----TQGQIYGIKVDIRDAYGNVKIPVLCKLIQSILLDSEKKNFIVDHISNQFVARRKIYKWNHGLLQGDPLSGCLCELYMAFMDRLYFSNL------------------------------DKDAFIHRTVDDYFFCSP-HPHKVYDFELLIKGV------YQVNPTKTRTNLPQDEIPYCGKIFNLTYKLPPNYEIRHKFKDNPARFL-QKAMDF--PFICNS-FTK-
6HHPRED-g3kyl_A0.1430.8356.429threading_6LQKRFYKVVNVEPNLRPKHNLFLLDNIVKIIAFYYKPIKTLNGH----EIKFI--RKEEYISFESKVFHKLKKMKYLVRGV-LNIIPKQDN-FRAIVFPSPFFKLLTSKIYKVL----EE-------KYKTSGS----LYTCWSEFTQK-TQGQIYGIKVDIRDAYGNVKIPVLCKLIQSILLDSEKKNFIVDHISNQFVARRKIYKWNHGLLQGDPLSGCLCELYMAFMDRLYFSNL------------------------------DKDAFIHRTVDDYFFCSP-HPHKVYDFELLIKGV------YQVNPTKTRTNLPQDEIPYCGKIFNLRTKLPPNYEIRHKSDDNPARFL-QKAMDFFITVFNDQRTVFA
7SP33kyla0.1220.8722.229threading_7HKDAIPWLQNVEPNLRLLKHNLFLLDNVKPIIAFYYKKTLNGHEIKFIRKEEYISFESKVFHKLKKMKYLVEVQDEVKPRGVLNIIPKQDN-FRAI-VSIFPDSARKPFFKLLTSK----IYKVLEEKYKTSGSLYTCWSEFTQKT-----QGQIYGIKVDIRDAYGNVKIPVLCKLIQSHLLDSEKKNFIVDHISNQFVARRKIYKWNHGLLQGDPLSGCLCELYMAFMDRLY------------------------------FSNLDKDAFIHRTVDDYFFCSPHP-HKVYDFELLIKGV------YQVNPTKTRTRHPQDEIPYCGKIFNLTTHKFKLWNFNNQISDDNPARFLQKAMDFPFICNSFTKFEFN
8SAM-T991rw3A10.1590.6860.760threading_8-------------------------MGLAVRQAPLIIPLKATSTPVSIKQYPMSQEARLGPHIQRLLDQGILVPCQSPWNTPLLPVKKPGNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDLKDAFFCLRLHPTSQPLFAFEW-------------------RDPEMGIS---------------------GQLTWTRLPQGFKNSPTLFDEALHRADFRIQHPD---------------------------------LILLQYVDDLLLAAT-SELDCQQGTRALLQTL-GNLGYRASAKKAQIC--QKQVKYLGYLLKEGQRWLTEARKETVMGQPTPKTPRQLR----------------
9MUSTER3du6A20.1580.6381.011threading_9---------------------------------------------------RKEEYISFESKVFHKLKKM-VQDEVKPRG-VLNIIPKQDNFRAIVSIP---DSARKPFFKLLTSKIYKV----LEEKYKTSGSLYTCWSEFTQKT-----QGQIYGIKVDIRDAYGNVKIPVLCKLIQSHLLDSEKKNFIVDHISNQFVAFRKIYKWNHGLLQGDPLSGCLCELYMAFMDRLYFS------------------------------NLDKDAFIHRTVDDYFFCSP-HPHKVYDFELLIKGVY------QVNPTKTRTNHPQDEIPYCGKIFNL---TTRQVRTL-------------------------------
10SPARKS1sh0a0.1350.8881.294threading_10MRDQLKPFTEPRGKPPLEAAKKTIINVLSFAQACASLDKTT---SSGHDCWNGESFTGKLADQASKANLMFEEG--KNMTPVYTGALKGKIKKRLLWGSDLATMIRCARAFGGLMDELKTHTLPIRVGMNMNEDGPIIFERHS---------RYRYHYDADYSRWDSTQQLAAALEIMVKFSSEPHLAQVVAEDLLSPVDVGDFTISINEGLPSGVPCTSQWNSIAHWLLTLCALSEVTNL----------------------SPDIIQANSLFSFYGDDEIVSTDIKLD-----PEKLTAKLKE-YGLKPTRPDLVISEDLNGLTFLRRTVTRDPADPSETMIPHSQRPIQLMSLLGEAPAFYSKISKLVIAELG

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.499 to 1mu2A
SCOP code=c.55.3.1
TM-score=0.524 to 1mu2A
SCOP code=c.55.3.1
TM-score=0.496 to 1mu2A
SCOP code=c.55.3.1
TM-score=0.522 to 1mu2A
SCOP code=c.55.3.1
TM-score=0.532 to 1mu2A
SCOP code=c.55.3.1