Template-based Modeling Results for YNJF_ECOLI


  Submitted Primary Sequence

>Length 206
MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILLNRLLDGLDGALARRRELTDAGGFLDISLDFLFYALVPFGFILAAPEQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTETILLFVLGCLFPAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILLNRLLDGLDGALARRRELTDAGGFLDISLDFLFYALVPFGFILAAPEQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTETILLFVLGCLFPAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILLNRLLDGLDGALARRRELTDAGGFLDISLDFLFYALVPFGFILAAPEQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTETILLFVLGCLFPAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ
33232013102200220030013120012000000000000000000001000000000001001001010022332131100000001000100000000000021001000000000000000000000001333133222223111111001301100000000000010000000000000000001001101111322355
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILLNRLLDGLDGALARRRELTDAGGFLDISLDFLFYALVPFGFILAAPEQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTETILLFVLGCLFPAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ
1SPARKS2hyja0.0890.8741.018threading_1---AEAQATRGRILGRAAEIASEEGITIGRLAELEMSKSGVHKHFGTKETLQISTLDKAFVDFWHRV---VEPALAEPPGLRRLRAVCANSVGYLLLTAALSEYDGRPGRVRDAVAEVWSRWREQLRADLTAAVDKGELPAGFD-------------VEQALFEIVAAGLALNAAMQLQ-----HDRTAADRARRAIERALAQS--
2PROSPECT21t33A0.0831.0001.221threading_2MTTTKGEQAKSQLIAAALAQFGEYGLHATTRDIAALAGQNIAAITYYFGDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTEKAELIYQTVTCHIDLILHGLTQ
3HHPRED-g1x3k_A0.0990.3451.135threading_3NVGN--DKGFQKVIADMSGPHVARPITHGSYNDLRGVIY--DSMHSTHGAAWNKMMDNFFYVFYECLDGRCSQFS-----------------------------------------------------------------------------------------------------------------------------------
4PROSPECT22bkuB20.1480.9511.101threading_4QLTLEDAQSLQELQSNILTVLAAKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDADISNSSNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVALDYQIKVLEAVLDAYVGIVAGLHDKPEA----------LFPYVGTIFQFIAQVAEDATSRAAVGLIGDIAAMATKDTARWAREQQKRQLSL
5PROSPECT22fbqA0.1030.8931.096threading_5A----QSETVERILDAAEQLFAEKGFAETSLRLITSKAGVNLAAVNYHKALIQAVFSRFLGPFCASLEKELDRRAQHATLEDLLHLLVSQAMALSIFMRLLGLAFSQSQGHLRKYLEEVYGKVFRRYMLLVNEA----------------APKLPPIELFWRVHFMLGAAAFSMSGIKALRAMASTEQVMHLMVPFF--AAGMRID
6PROSPECT23a0oA30.0690.9901.093threading_6WLNSEQHCGWAEFYEKSVEPWLERPVMPDCQEVIYAIRHLAIAGRVLGRDDLLDASRKWLLAVAAWDTKWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARISLSAVLTPACIALEAGEWLDYTVEFLATLYSPWAGTDGG--WAEGPHYWMTGMAYLIEAANLIRSYLKLGYNVRQFAGVTGNGHYQWYFDHIKADATG
7PROSPECT21t56A0.0970.9031.089threading_7GDDRE-----LAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYEAVLLTLLDRVVNQADMALQTLAENPADTDRWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLP-------------AHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIW--VTSIYGE
8MUSTER1qgkA0.1000.9760.758threading_8IDPEQLQDKSNEILTAIIQGMR-KEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFY----AKGALQYLVPILTQTLTNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKN
9SPARKS3mnla0.0990.8300.965threading_9LGSEAQRERRKRILDATMAIASKGGVQMRAVADADVAVGTLYRYFPSKVHLLVSALGREFSRIDAKTD--RSAVAGAT--------PFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVEKLIDSMFARAMAGEPT-------------------------EDQYHIARVISDVWLSNLLAWLTRRASATDVSKR
10PROSPECT22db0A0.0830.9901.081threading_10DIREALEKILIMAKESVLKKLIELLDDDLW-TVVKNAISIIMVIAKTREDLYEPMLKKLFSLLKKSEAIPLTQEIAKA-FGQMAKEKPELVKSMIPVLFANYRIGDEKTKINVSYALEEIAKALMASIVRDFMSMLSSKNREDKLTALNFIEAMGENSFKYVNPFLPRIIEIVRASAVEALVHLALRKVVIKRLTVKEGISRLLLL

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.946 to 1t33A
SCOP code=a.4.1.9
TM-score=0.801 to 2hyjA
SCOP code=a.4.1.9
TM-score=0.935 to 1t33A
SCOP code=a.4.1.9
TM-score=0.394 to 2d8eA
SCOP code=a.130.1.1
TM-score=0.592 to 3ea5B
SCOP code=a.118.1.1