Template-based Modeling Results for YQJI_ECOLI

Submitted Primary Sequence

>Length 207
MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD
553323100313122323110313323231111113121021011210311233222113010100000002222210110020023113121212201000002002432102022232222101003300310231231032013102120112223312302200210120022213323223200320020022002102513
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD
1	MUSTER	3f8fA	0.170	0.541	1.613	threading_1	--------------------------------------------------MAEIPKEMLRAQTNVILLNVLKQGDNYVYGIIKQVKEASNGEMELNEATLYTIFKRLEKDGIISSYWGDGRRKYYRLTEIGHENMRLAFESWSRVDKIIENLEANKK---SEAIK------------------------------------------
2	SPARKS	3f8ba	0.178	0.488	2.353	threading_2	------------------------------------------------------PKEMLRAQTNVILLNVLKQGDNYVYGIIKQVKEASNGEMELNEATLYTIFKRLEKDGIISSYWGDGRRKYYRLTEIGHENMRLAFESWSRVDKIIENLEAN----------------------------------------------------
3	PROSPECT2	1yg2A	0.206	0.681	1.915	threading_3	-------------------------------------------------------------SLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMGEQGLVTC-----VLEVYSITQAGRSALGEWFDQPDEFSAKLMACSVQSAEPYRLQLAELVEESRKLVAHYQEPAVLDKQQRLERIQWADEVLAELNAMA
4	PPA-I	3f8fA	0.161	0.541	2.084	threading_4	--------------------------------------------------MAEIPKEMLRAQTNVILLNVLKQGDNYVYGIIKQVKEASNGEMELNEATLYTIFKRLEKDGIISSYWGGGRRKYYRLTEIGHENMRLAFESWSRVDKIIENLEANKKSEAIK---------------------------------------------
5	HHPRED-l	1xma_A	0.221	0.459	3.009	threading_5	---------------------------------------------------------VIRGYVDTIILSLLIEGDSYGYEISKNIRIKTDELYVIKETTLYSAFARLEKNGYIKSYY--KRRTYYRITPEGIKYYKQKCEEWELTKKVINKFVK-----------------------------------------------------
6	HHPRED-g	1xma_A	0.214	0.473	2.967	threading_6	-------------------------------------------------------SDVIRGYVDTIILSLLIEGDSYGYEISKNIRIKTDELYVIKETTLYSAFARLEKNGYIKSYYG-KRRTYYRITPEGIKYYKQKCEEWELTKKVINKFVK-----------------------------------------------------
7	SP3	3hhha	0.202	0.478	2.047	threading_7	-----------------------------------------------------KQTELLKGILEGLVLAIIQRKETYGYEITKILNDQ--GFTEIVEGTVYTILLRLEKNQWVIAEKKPEPRKFYRLTSSGEAELADFWQRWTLLSKQVNKKKN-----------------------------------------------------
8	SAM-T99	1xmaB	0.216	0.493	3.600	threading_8	----------------------------------------------------VISSDVIRGYVDTIILSLLIEGDSYGYEISKNIRIKTDELYVIKETTLYSAFARLEKNGYIKSYYGETRRTYYRITPEGIKYYKQKCEEWELTKKVINKFVK-----------------------------------------------------
9	MUSTER	1xmaB	0.216	0.493	1.597	threading_9	----------------------------------------------------VISSDVIRGYVDTIILSLLIEGDSYGYEISKNIRIKTDELYVIKETTLYSAFARLEKNGYIKSYYGEERRTYYRITPEGIKYYKQKCEEWELTKKVINKFVK-----------------------------------------------------
10	SPARKS	1xmaa	0.222	0.478	2.333	threading_10	-------------------------------------------------------SDVIRGYVDTIILSLLIEGDSYGYEISKNIRIKTDELYVIKETTLYSAFARLEKNGYIKSYYETKRRTYYRITPEGIKYYKQKCEEWELTKKVINKFVK-----------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.541 to 2p8tA SCOP code=a.4.5.72	TM-score=0.547 to 2p8tA SCOP code=a.4.5.72	TM-score=0.569 to 2p8tA SCOP code=a.4.5.72	TM-score=0.650 to 1yg2A SCOP code=a.4.5.61	TM-score=0.554 to 1xsxA SCOP code=a.4.5.49