Request for the benchmark dataset (24 GPCR-I-TASSER)

Dear Zhang group members,

The name is Jayaraman T, pursuing Ph.D. in Protein Engineering, Biomolecular Lab, here in Pusan National University, Busan.

Here, we recently developed a method "Joint-based description of protein structure: its application to the geometric characterization of membrane proteins", and interested in using the same application for the evaluation of computational models. To do this, we recently came across your paper and demonstrated with the low and high c-score models that are obtained from http://zhanglab.ccmb.med.umich.edu/GPCR-HGmod database.

We would like to extend our analysis further to the 24 benchmark dataset that you have used in the study. It would be really grateful if you could provide us the computational models of this 24 benchmark dataset including the models generated from threading, modeler, ab-initio and GPCR-I-TASSER.

We feel that the dataset can be useful to show the correlation between the score from our models and TM-score and C-scores as well. We hope that the data we reuse will be potentially important and relevant to the GPCRs structure characterization and evaluations.

Email: jaai.nasa@gmail.com and jram@pusan.ac.kr

We kindly request you to do the needful and looking forward to hearing at your earliest convenience.

Thank you.