Dear Team!
I'm trying to compute BindProfX score to the 983 SKEMPI pdb complexes for which I couldn't find the score/alignment in your released paper data. For this I'm using your script run_align.pl like so:
../../BindProfX/bin/XBindProf/run_align.pl bindprofx/1JRH/complex.pdb 0.5 ../data/XBindProfPaperData/align/1JRH.aln
However the script fails with the following error:
"too many interface for bindprofx/1JRH/complex.pdb at ../../BindProfX/bin/XBindProf/run_align.pl line 60, line 49933."
Could you please shed some light on this?
Best regards,
Yotam
P.s
I'm attaching the original pdb file that I used under alias "complex.pdb"