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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP TM-fold DECOYS POTENTIAL RW HPSF CASP7 CASP8 CASP9 CASP10 CASP11 CASP12

Search BioLiP database23492 records returned with your search. Click here to export your searching results in CSV format .
Hover over the Site # to view the binding site residues; Hover over the Ligand to view the ligand name; Hover over the GO terms to view all go terms.
Click the BioLiP ID to show the detailed information of the binding site.


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BioLiP ID PDB
(Resolution Å)
Site # Ligand EC number GO terms UniProt PubMed Binding affinity
BL0000050 11gsA (2.3) BS02 EAA 2.5.1.18 GO:0000302 ... P09211 9426214 Ki=1.5uM, from Binding MOAD
Ki=1.5uM, from PDBbind-CN
BL0000052 11gsB (2.3) BS02 EAA 2.5.1.18 GO:0000302 ... P09211 9426214 Ki=1.5uM, from Binding MOAD
Ki=1.5uM, from PDBbind-CN
BL0000062 13gsA (1.9) BS02 SAS 2.5.1.18 GO:0000302 ... P09211 10452896 Ki=24uM, from Binding MOAD
Ki=24uM, from PDBbind-CN
BL0000064 13gsB (1.9) BS02 SAS 2.5.1.18 GO:0000302 ... P09211 10452896 Ki=24uM, from Binding MOAD
Ki=24uM, from PDBbind-CN
BL0000078 16pkA (1.6) BS01 BIS 2.7.2.3 GO:0000166 ... P07378 9642090 Ki=6uM, from PDBbind-CN
BL0000079 17gsA (1.9) BS01 GTX 2.5.1.18 GO:0000302 ... P09211 N/A Kd=10000nM, from BindingDB
BL0000080 17gsB (1.9) BS01 GTX 2.5.1.18 GO:0000302 ... P09211 N/A Kd=10000nM, from BindingDB
BL0000081 181lA (1.8) BS01 BNZ 3.2.1.17 GO:0003796 ... P00720 7612599 Ka=5700M^-1, from Binding MOAD
Kd=175000nM, from BindingDB
BL0000082 182lA (1.8) BS01 BZF 3.2.1.17 GO:0003796 ... P00720 7612599 Ka=8900M^-1, from Binding MOAD
Kd=112000nM, from BindingDB
BL0000083 183lA (1.8) BS01 DEN 3.2.1.17 GO:0003796 ... P00720 7612599 Ka=5170M^-1, from Binding MOAD
Kd=193000nM, from BindingDB
BL0000084 184lA (1.8) BS01 I4B 3.2.1.17 GO:0003796 ... P00720 7612599 Ka=51000M^-1, from Binding MOAD
Kd=19000nM, from BindingDB
BL0000085 185lA (1.8) BS01 IND 3.2.1.17 GO:0003796 ... P00720 7612599 Kd=289uM, from Binding MOAD
Kd=290000nM, from BindingDB
BL0000086 186lA (1.8) BS01 N4B 3.2.1.17 GO:0003796 ... P00720 7612599 Kd=14uM, from Binding MOAD
Kd=14000nM, from BindingDB
BL0000087 187lA (1.8) BS01 PXY 3.2.1.17 GO:0003796 ... P00720 7612599 Kd=422uM, from Binding MOAD
Kd=422000nM, from BindingDB
BL0000088 188lA (1.8) BS01 OXE 3.2.1.17 GO:0003796 ... P00720 7612599 Kd=469uM, from Binding MOAD
Kd=470000nM, from BindingDB
BL0000136 1a07A (2.2) BS01 III 2.7.1.112 GO:0016310 ... P12931 9174343 Kd=0.4uM, from Binding MOAD
Kd=0.4uM, from PDBbind-CN
BL0000137 1a07B (2.2) BS01 III 2.7.1.112 GO:0008543 ... P12931 9174343 Kd=0.4uM, from Binding MOAD
Kd=0.4uM, from PDBbind-CN
BL0000138 1a08A (2.2) BS01 III 2.7.1.112 GO:0007172 ... P12931 9174343 Kd=2.4uM, from Binding MOAD
Kd=2.4uM, from PDBbind-CN
BL0000139 1a08B (2.2) BS01 III 2.7.1.112 GO:0007155 ... P12931 9174343 Kd=2.4uM, from Binding MOAD
Kd=2.4uM, from PDBbind-CN
BL0000140 1a09A (2) BS01 III 2.7.1.112 GO:0051897 ... P12931 9174343 Kd=0.2uM, from PDBbind-CN
BL0000141 1a09B (2) BS01 III 2.7.1.112 GO:0045124 ... P12931 9174343 Kd=0.2uM, from PDBbind-CN
BL0000142 1a09B (2) BS02 III 2.7.1.112 GO:0045124 ... P12931 9174343 Kd=0.2uM, from PDBbind-CN
BL0000189 1a0qL (2.3) BS02 HEP N/A N/A N/A 9753552 Ki=27nM, from Binding MOAD
Ki=27nM, from PDBbind-CN
BL0000191 1a0qH (2.3) BS02 HEP N/A N/A N/A 9753552 Ki=27nM, from Binding MOAD
Ki=27nM, from PDBbind-CN
BL0000196 1a0tP (2.4) BS01 SUC N/A GO:0006810 ... P22340 9437428 Kd=50mM, from Binding MOAD
Kd=50mM, from PDBbind-CN
BL0000197 1a0tP (2.4) BS02 SUC N/A GO:0006810 ... P22340 9437428 Kd=50mM, from Binding MOAD
Kd=50mM, from PDBbind-CN
BL0000199 1a0tQ (2.4) BS01 SUC N/A GO:0006810 ... P22340 9437428 Kd=50mM, from Binding MOAD
Kd=50mM, from PDBbind-CN
BL0000200 1a0tQ (2.4) BS02 SUC N/A GO:0006810 ... P22340 9437428 Kd=50mM, from Binding MOAD
Kd=50mM, from PDBbind-CN
BL0000202 1a0tR (2.4) BS01 SUC N/A GO:0006810 ... P22340 9437428 Kd=50mM, from Binding MOAD
Kd=50mM, from PDBbind-CN
BL0000203 1a0tR (2.4) BS02 SUC N/A GO:0006810 ... P22340 9437428 Kd=50mM, from Binding MOAD
Kd=50mM, from PDBbind-CN

                                                                                                                                                                                                                                                                                                                                             

Reference:
Jianyi Yang, Ambrish Roy and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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