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GPCR

NameC5a anaphylatoxin chemotactic receptor 1
SpeciesHomo sapiens (Human)
GeneC5AR1
Synonymcomplement component 5a receptor 1
complement C5a receptor
C5A
CD88
C5R1
[ Show all ]
DiseaseVasculitis
Atopic dermatitis
Inflammatory disease
Rheumatoid arthritis
Length350
Amino acid sequenceMDSFNYTTPDYGHYDDKDTLDLNTPVDKTSNTLRVPDILALVIFAVVFLVGVLGNALVVWVTAFEAKRTINAIWFLNLAVADFLSCLALPILFTSIVQHHHWPFGGAACSILPSLILLNMYASILLLATISADRFLLVFKPIWCQNFRGAGLAWIACAVAWGLALLLTIPSFLYRVVREEYFPPKVLCGVDYSHDKRRERAVAIVRLVLGFLWPLLTLTICYTFILLRTWSRRATRSTKTLKVVVAVVASFFIFWLPYQVTGIMMSFLEPSSPTFLLLKKLDSLCVSFAYINCCINPIIYVVAGQGFQGRLRKSLPSLLRNVLTEESVVRESKSFTRSTVDTMAQKTQAV
UniProtP21730
Protein Data Bank6c1r, 6c1q, 5o9h
GPCR-HGmod modelP21730
3D structure modelThis structure is from PDB ID 6c1r.
BioLiPBL0415511, BL0415514, BL0415513, BL0415512, BL0401194,BL0401195,BL0401196,
Therapeutic Target DatabaseT15439
ChEMBLCHEMBL2373
IUPHAR32
DrugBankN/A

Ligand

NameCHEMBL412249
Molecular formulaC53H80N14O15S
IUPAC name(2S)-2-[[(2R)-2-[[(2S)-2-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-6-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-amino-3-(4-hydroxyphenyl)propanoyl]amino]-3-hydroxypropanoyl]amino]-3-phenylpropanoyl]amino]hexanoyl]amino]-3-carboxypropanoyl]amino]-4-methylsulfanylbutanoyl]pyrrolidine-2-carbonyl]amino]propanoyl]amino]propanoyl]amino]-5-(diaminomethylideneamino)pentanoic acid
Molecular weight1185.37
Hydrogen bond acceptor19
Hydrogen bond donor16
XlogP-7.1
SynonymsBDBM50033560
Tyr-Ser-Phe-Lys-Asp-Met-Pro-Ala-D-Ala-Arg
Inchi KeyAVUWROMNAKGUPJ-ABXBZLCRSA-N
Inchi IDInChI=1S/C53H80N14O15S/c1-29(43(72)59-30(2)44(73)63-37(52(81)82)14-9-22-58-53(56)57)60-50(79)41-15-10-23-67(41)51(80)36(20-24-83-3)62-48(77)39(27-42(70)71)65-46(75)35(13-7-8-21-54)61-47(76)38(26-31-11-5-4-6-12-31)64-49(78)40(28-68)66-45(74)34(55)25-32-16-18-33(69)19-17-32/h4-6,11-12,16-19,29-30,34-41,68-69H,7-10,13-15,20-28,54-55H2,1-3H3,(H,59,72)(H,60,79)(H,61,76)(H,62,77)(H,63,73)(H,64,78)(H,65,75)(H,66,74)(H,70,71)(H,81,82)(H4,56,57,58)/t29-,30+,34-,35-,36-,37-,38-,39-,40-,41-/m0/s1
PubChem CID10374110
ChEMBLCHEMBL412249
IUPHARN/A
BindingDB50033560
DrugBankN/A

Structure

SDF download

2D structure
Lipinski's druglikenessThis ligand has more than 5 hydrogen bond donor.
This ligand has more than 10 hydrogen bond acceptor.
This ligand is heavier than 500 daltons.

Experimental Data

ParameterValueReferenceDatabase source
EC50<1000000.0 nMPMID7658455BindingDB,ChEMBL
EC505600.0 nMPMID7658455BindingDB,ChEMBL

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