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GPCR

Name5-hydroxytryptamine receptor 1D
SpeciesHomo sapiens (Human)
GeneHTR1D
SynonymSerotonin 1D alpha receptor
serotonin receptor 1D
HTRL
Htr1db
5-HT-1D
[ Show all ]
DiseaseAcute migraine
Epilepsy
Migraine headaches
Mood disorder
Migraine
[ Show all ]
Length377
Amino acid sequenceMSPLNQSAEGLPQEASNRSLNATETSEAWDPRTLQALKISLAVVLSVITLATVLSNAFVLTTILLTRKLHTPANYLIGSLATTDLLVSILVMPISIAYTITHTWNFGQILCDIWLSSDITCCTASILHLCVIALDRYWAITDALEYSKRRTAGHAATMIAIVWAISICISIPPLFWRQAKAQEEMSDCLVNTSQISYTIYSTCGAFYIPSVLLIILYGRIYRAARNRILNPPSLYGKRFTTAHLITGSAGSSLCSLNSSLHEGHSHSAGSPLFFNHVKIKLADSALERKRISAARERKATKILGIILGAFIICWLPFFVVSLVLPICRDSCWIHPALFDFFTWLGYLNSLINPIIYTVFNEEFRQAFQKIVPFRKAS
UniProtP28221
Protein Data BankN/A
GPCR-HGmod modelP28221
3D structure modelThis predicted structure model is from GPCR-EXP P28221.
BioLiPN/A
Therapeutic Target DatabaseT11072
ChEMBLCHEMBL1983
IUPHAR3
DrugBankBE0000659

Ligand

NameCHEBI:48565
Molecular formulaC21H26N2O3
IUPAC namemethyl 18-hydroxy-1,3,11,12,14,15,16,17,18,19,20,21-dodecahydroyohimban-19-carboxylate
Molecular weight354.45
Hydrogen bond acceptor4
Hydrogen bond donor2
XlogP2.9
SynonymsNSC407306
Methyl 17-hydroxyyohimban-16-carboxylate
methyl 17-hydroxy-20xi-yohimban-16-carboxylate
Corynanthin
Amsonin
[ Show all ]
Inchi KeyBLGXFZZNTVWLAY-UHFFFAOYSA-N
Inchi IDInChI=1S/C21H26N2O3/c1-26-21(25)19-15-10-17-20-14(13-4-2-3-5-16(13)22-20)8-9-23(17)11-12(15)6-7-18(19)24/h2-5,12,15,17-19,22,24H,6-11H2,1H3
PubChem CID2866
ChEMBLN/A
IUPHARN/A
BindingDB86230
DrugBankN/A

Structure

SDF download

2D structure
Lipinski's druglikenessThis ligand satisfies Lipinski's rule of five.

Experimental Data

ParameterValueReferenceDatabase source
Ki<10000.0 nMPeroutka et al., PMID1989PDSP
Ki15.84 nMPMID7984267PDSP
Ki19.95 nMPMID10611634PDSP
Ki21.87 nMPMID7984267PDSP
Ki25.11 nMPMID10611634PDSP
Ki27.0 nMPMID1565658PDSP
Ki40.0 nMPMID1565658PDSP
Ki47.86 nMPMID7984267PDSP
Ki51.0 nMPMID1652050PDSP
Ki58.88 nMPMID7984267PDSP
Ki59.0 nMPMID1652050PDSP
Ki160.0 nMPeroutka et al., PMID1989PDSP
Ki288.0 nMWaeber et al., PMID1988PDSP
Ki759.0 nMWaeber et al., PMID1988PDSP

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