Detailed GPCR-I-TASSER Statistics for P59533

Submitted Sequence

>sp|P59533|T2R38_HUMAN
MLTLTRIRTVSYEVRSTFLFISVLEFAVGFLTNAFVFLVNFWDVVKRQALSNSDCVLLCL
SISRLFLHGLLFLSAIQLTHFQKLSEPLNHSYQAIIMLWMIANQANLWLAACLSLLYCSK
LIRFSHTFLICLASWVSRKISQMLLGIILCSCICTVLCVWCFFSRPHFTVTTVLFMNNNT
RLNWQIKDLNLFYSFLFCYLWSVPPFLLFLVSSGMLTVSLGRHMRTMKVYTRNSRDPSLE
AHIKALKSLVSFFCFFVISSCAAFISVPLLILWRDKIGVMVCVGIMAACPSGHAAILISG
NAKLRRAVMTILLWAQSSLKVRADHKADSRTLC

Predicted Secondary Structure

                  20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220                 240                 260                 280                 300                 320
                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |             
Sequence MLTLTRIRTVSYEVRSTFLFISVLEFAVGFLTNAFVFLVNFWDVVKRQALSNSDCVLLCLSISRLFLHGLLFLSAIQLTHFQKLSEPLNHSYQAIIMLWMIANQANLWLAACLSLLYCSKLIRFSHTFLICLASWVSRKISQMLLGIILCSCICTVLCVWCFFSRPHFTVTTVLFMNNNTRLNWQIKDLNLFYSFLFCYLWSVPPFLLFLVSSGMLTVSLGRHMRTMKVYTRNSRDPSLEAHIKALKSLVSFFCFFVISSCAAFISVPLLILWRDKIGVMVCVGIMAACPSGHAAILISGNAKLRRAVMTILLWAQSSLKVRADHKADSRTLC
Prediction CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCSSSSSCCCCSSSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Conf.Score 998886101069999999999999999999999999999999999369898788999999999888365089979999967352555443579999999999399999999999998456368896699999987448276999999999999999999984146551035553169659998741168999999999999999999999999999999999999861878999999809999999999999999999999999999998713566999999999999789867998608739999999999860411468999999877789

Predicted Solvent Accessibility

                  20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220                 240                 260                 280                 300                 320
                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |             
Sequence MLTLTRIRTVSYEVRSTFLFISVLEFAVGFLTNAFVFLVNFWDVVKRQALSNSDCVLLCLSISRLFLHGLLFLSAIQLTHFQKLSEPLNHSYQAIIMLWMIANQANLWLAACLSLLYCSKLIRFSHTFLICLASWVSRKISQMLLGIILCSCICTVLCVWCFFSRPHFTVTTVLFMNNNTRLNWQIKDLNLFYSFLFCYLWSVPPFLLFLVSSGMLTVSLGRHMRTMKVYTRNSRDPSLEAHIKALKSLVSFFCFFVISSCAAFISVPLLILWRDKIGVMVCVGIMAACPSGHAAILISGNAKLRRAVMTILLWAQSSLKVRADHKADSRTLC
Prediction 735434344032102220132133123313311220021001000453303101100000011112002113332210000021323331000000010133123001000000000000002231100000133043200110132223233111110121233332323343334321223142332220211123333333233213313310110022023203432544411314002200100020222133333212310012233443001000112002100100101013143013001200220202032447463445443

Predicted Normalized B-Factor


Read more about predicted normalized B-factor

  Top 10 Templates Used by GPCR-I-TASSER


Rank PDB
Hit
Iden1Iden2Cov.Norm.
Z-score
Download
Align.
                   20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220                 240                 260                 280                 300                 320
                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |             
Sec.Str
Seq
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCSSSSSCCCCSSSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
MLTLTRIRTVSYEVRSTFLFISVLEFAVGFLTNAFVFLVNFWDVVKRQALSNSDCVLLCLSISRLFLHGLLFLSAIQLTHFQKLSEPLNHSYQAIIMLWMIANQANLWLAACLSLLYCSKLIRFSHTFLICLASWVSRKISQMLLGIILCSCICTVLCVWCFFSRPHFTVTTVLFMNNNTRLNWQIKDLNLFYSFLFCYLWSVPPFLLFLVSSGMLTVSLGRHMRTMKVYTRNSRDPSLEAHIKALKSLVSFFCFFVISSCAAFISVPLLILWRDKIGVMVCVGIMAACPSGHAAILISGNAKLRRAVMTILLWAQSSLKVRADHKADSRTLC
14grvA 0.11 0.16 0.86 1.31Download --NSDLDVNTDIYSKVLVTAIYLALFVVGTVGNSVTLFTLA----RKSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAGDAGCRGYYFLRDACTYATALNVASLSVARYLAIC---HPFKAK--LMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGT--HPGGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVM--------SGSVQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWTHYFYMLTNALAYASSAINPILYNLVSANFRQV--------------------------
25tjvA 0.12 0.19 0.83 2.82Download ---------LNPSQQLAIAVLSLTLGTFTVLENLLVLCVILHS--RSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF--HRKDSRNVFLFKLGGVTASFTASVGSLFLAAIDRYISIHRPLA----YKRIVTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHID------------ETYLMFWIGVTSVLLLFIVYAYMYILWKAGKRAMSFSD--------QARMDIRLAKTLVLILVVLIICWGPLLAIMVYDVFGKMKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMF---------------------
34n6hA 0.11 0.22 0.88 2.26Download --SPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRY--TKMK-TATNIYIFNLALADALATST--LPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKA----LDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDG-AVVCMLQ------FPSPSWYWDTVTKICVFLFVVPILIITVCYGLMLLRLRSV------RLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDPLVVAALHLCIALGYSSLNPVLYAFLDENFKRCFRQLCRKPCG----------------
44djh 0.10 0.22 0.87 1.56Download ----------SPAIPVIITAVYSVVFVVGLVGNSLVMFVIIR---YTKMKTATNIYIFNLALADALVTTTMPFQST-VYLMNSWPF-GDVLCKIVLSIDYYNMFTSIFTLTMMSVDRYIAV---CHPVKAL-DFRTPLKAKIINICIWLLSSSVGISAIVLGGTKVR-E--DVDVECSLQFPDDDYSDLFMKI--CVFIFAFVIPVLIIIVCYTLMILRLKSVRLLSGNIFTPAYREKDRNLRRITRLVLVVVAVFVVCWTPIHIFILVEALGAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFP-------------------
55glh 0.09 0.16 0.86 1.17Download -PPCQGPIEIKETFKYINTVVSCLVFVLGIIGNSTLLYIIYK--------NGPNILIASLALGDLLHIVIAIPINVYKLL-AEDWPFGAEMCKLVPFIQKASVGITVLSLCALSIDRYRAVAS---W-----------WTAVEIVLIWVVSVVLAVPEAIGFDIITMD-Y--KGSYLRICLLHPVQKAFMQFYDWWLFSFYFCLPLAITAFFYTLMTCEMLRKNEGLRLTWDAYLNDHLKQRREVAKTVFCLVLVFALCWLPLHLARILKLTLYNLVLDYIGINMASLNSCANPIALYLVSKRFKNAFKSAL---------------------
64djhA 0.09 0.20 0.84 1.46Download -----------PAIPVIITAVYSVVFVVGLVGNSLVMFVIIRY---TKMKTATNIYIFNLALADALVTTTMPFQSTVYLM--NSWPFGDVLCKIVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPLKAKIINICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDD------DYSWWDLFMKICVFIFAFVIPVLIIIVCYTLMILRLKSVRLLSD-----------RNLRRITRLVLVVVAVFVVCWTPIHIFILVEALGSALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFP-------------------
74ib4 0.13 0.17 0.85 1.71Download ---------------HWAALLILMVIIPTIGGNTLVILAVSL---EKKLQYATNYFLMSLAVADLLVGLFVMPIALLTIMFEAMWPLPLVLCPAWLFLDVLFSTASIWHLCAISVDRYIAIKKPIQANQYNSRATAFIKITVVWLISIGIAIPVPI---KGIETNP---NNITCVLTK------ER---FGDFMLFGSLAAFFTPLAIMIVTYFLTIHALQKKAADLEDNYIQKYLQTISNEQRASKVLGIVFFLFLLMWCPFFITNITLVLCDLQMLLEIFVWIGYVSSGVNPLVYTLFNKTFRDAFGRYITCN------------------
84n6hA 0.11 0.22 0.88 2.81Download -GSPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRY---TKMKTATNIYIFNLALADALA--TSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVK----ALDFRTPAKAKLINICIWVLASGVGVPIMVM--------AVTRPRDGAVVCMLQPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSV------RLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRK---PCG-------------
94djhA 0.11 0.20 0.83 1.46Download ----------SPAIPVIITAVYSVVFVVGLVGNSLVMFVIIR----TKMKTATNIYIFNLALADALV--TTTMPFQSTVYLMNSWPFGDVLCKIVLSIDYYNMFTSIFTLTMMSVDRYIAVC---HPVKA-LDFRTPLKAKIINICIWLLSSSVGISAIVLKVREDVDVIECSLQFPDD-----DYSWWDLFMKICVFIFAFVIPVLIIIVCYTLMILRLKSVRLL------------DRNLRRITRLVLVVVAVFVVCWTPIHIFILVEALGSALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFP-------------------
105c1mA 0.10 0.15 0.86 1.37Download SHSLPQTGSPSMVTAITIMALYSIVCVVGLFGNFLVMYVIVR---YTKMKTATNIYIFNLALADALA--TSTLPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVC---HPVK-ALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTW-----YWENLLKICVFIFAFIMPVLIITVCYGLMILRLKS------VRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCF-------------------------
(a)All the residues are colored in black; however, those residues in template which are identical to the residue in the query sequence are highlighted in color. Coloring scheme is based on the property of amino acids, where polar are brightly coloured while non-polar residues are colored in dark shade. (more about the colors used)
(b)Rank of templates represents the top ten threading templates used by GPCR-I-TASSER.
(c)Ident1 is the percentage sequence identity of the templates in the threading aligned region with the query sequence.
(d)Ident2 is the percentage sequence identity of the whole template chains with query sequence.
(e)Cov. represents the coverage of the threading alignment and is equal to the number of aligned residues divided by the length of query protein.
(f)Norm. Z-score is the normalized Z-score of the threading alignments. Alignment with a Normalized Z-score >1 mean a good alignment and vice versa.
(g)Download Align. provides the 3D structure of the aligned regions of the threading templates.
(h)The top 10 alignments reported above (in order of their ranking) are from the following threading programs:
       1: MUSTER   2: FFAS-3D   3: SPARKS-X   4: HHSEARCH2   5: HHSEARCH I   6: Neff-PPAS   7: HHSEARCH   8: pGenTHREADER   9: wdPPAS   10: cdPPAS   

  Top 5 Models Predicted by GPCR-I-TASSER

Generated 3D models Estimated local accuracy of models
  • Download Model 1
  • C-score=-0.45 (Read more about C-score)
  • Estimated TM-score = 0.66±0.13
  • Estimated RMSD = 7.4±4.3Å

  • Download Model 2
  • C-score = -2.65

  • Download Model 3
  • C-score = -2.95

  • Download Model 4
  • C-score = -3.19

  • Download Model 5
  • C-score = -3.18


  • [Click on P59533_results.tar.bz2 to download the tarball file including all modeling results listed on this page]