Detailed GPCR-I-TASSER Statistics for Q7Z5H5

Submitted Sequence

>sp|Q7Z5H5|VN1R4_HUMAN
MASRYVAVGMILSQTVVGVLGSFSVLLHYLSFYCTGCRLRSTDLIVKHLIVANFLALRCK
GVPQTMAAFGVRYFLNALGCKLVFYLHRVGRGVSIGTTCLLSVFQVITVSSRKSRWAKLK
EKAPKHVGFSVLLCWIVCMLVNIIFPMYVTGKWNYTNITVNEDLGYCSGGGNNKIAQTLR
AMLLSFPDVLCLGLMLWVSSSMVCILHRHKQRVQHIDRSDLSPRASPENRATQSILILVS
TFVSSYTLSCLFQVCMALLDNPNSLLVNTSALMSVCFPTLSPFVLMSCDPSVYRFCFAWK
R

Predicted Secondary Structure

                  20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220                 240                 260                 280                 300
                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   | 
Sequence MASRYVAVGMILSQTVVGVLGSFSVLLHYLSFYCTGCRLRSTDLIVKHLIVANFLALRCKGVPQTMAAFGVRYFLNALGCKLVFYLHRVGRGVSIGTTCLLSVFQVITVSSRKSRWAKLKEKAPKHVGFSVLLCWIVCMLVNIIFPMYVTGKWNYTNITVNEDLGYCSGGGNNKIAQTLRAMLLSFPDVLCLGLMLWVSSSMVCILHRHKQRVQHIDRSDLSPRASPENRATQSILILVSTFVSSYTLSCLFQVCMALLDNPNSLLVNTSALMSVCFPTLSPFVLMSCDPSVYRFCFAWKR
Prediction CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCSSSSSSSSHHHHCCHHHHHHHHHHHHHCSSSCCCCHHHHHHHHHCCCSSHHHHHHHHHHHHHHHCCSSSSSSCCCCCCCCCCCCCCCSSSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHSSSSSC
Conf.Score 9867888865299998999999999999999998288889389999999999999999987999999957622278881699988788756057999999998551898689748766436457865899999999999986052489974886631364356717897268278999999999999999999999988899999999899860660888999998799999999999999999998899999999993689815531999997650564846642489863014013669

Predicted Solvent Accessibility

                  20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220                 240                 260                 280                 300
                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   | 
Sequence MASRYVAVGMILSQTVVGVLGSFSVLLHYLSFYCTGCRLRSTDLIVKHLIVANFLALRCKGVPQTMAAFGVRYFLNALGCKLVFYLHRVGRGVSIGTTCLLSVFQVITVSSRKSRWAKLKEKAPKHVGFSVLLCWIVCMLVNIIFPMYVTGKWNYTNITVNEDLGYCSGGGNNKIAQTLRAMLLSFPDVLCLGLMLWVSSSMVCILHRHKQRVQHIDRSDLSPRASPENRATQSILILVSTFVSSYTLSCLFQVCMALLDNPNSLLVNTSALMSVCFPTLSPFVLMSCDPSVYRFCFAWKR
Prediction 6524200100033133333322220131100000344321111000100131122103013311000000232214121001010110021020000000000200000003222013022302200011001213110212130002030333331333333231011033433211110211333233121003002000000011123102202334324333112100100000002003103310200000110334210011011020121120000000222420120112037

Predicted Normalized B-Factor


Read more about predicted normalized B-factor

  Top 10 Templates Used by GPCR-I-TASSER


Rank PDB
Hit		Iden1Iden2Cov.Norm.
Z-score		Download
Align.		                   20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220                 240                 260                 280                 300
                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   | 
Sec.Str
Seq		CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCSSSSSSSSHHHHCCHHHHHHHHHHHHHCSSSCCCCHHHHHHHHHCCCSSHHHHHHHHHHHHHHHCCSSSSSSCCCCCCCCCCCCCCCSSSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHSSSSSC
MASRYVAVGMILSQTVVGVLGSFSVLLHYLSFYCTGCRLRSTDLIVKHLIVANFLALRCKGVPQTMAAFGVRYFLNALGCKLVFYLHRVGRGVSIGTTCLLSVFQVITVSSRKSRWAKLKEKAPKHVGFSVLLCWIVCMLVNIIFPMYVTGKWNYTNITVNEDLGYCSGGGNNKIAQTLRAMLLSFPDVLCLGLMLWVSSSMVCILHRHKQRVQHIDRSDLSPRASPENRATQSILILVSTFVSSYTLSCLFQVCMALLDNPNSLLVNTSALMSVCFPTLSPFVLMSCDPSVYRFCFAWKR
14grvA 0.11 0.20 0.91 1.32Download IYSKVLVTAIYLALFVVGTVGNSVTLFTLAR-----KSLQTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHAFGDAGCRGYYFLRDACTYATALNVASLSVARYLAIC---HPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHPGGL-VCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVM------------SGSVQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWYFYMLTNALAYASSAINPILYNLVSANFRQV------
24phuA 0.13 0.18 0.86 1.92Download ---PQLSFGLYVAAFALGFPLNVLAI--RGATAHARLRLTPSAVYALNLGCSDLLLTVSLPLKAVEALASGAWPLPASLCPVFAVAHFAPLYAGGGFLAALSAARYLGAAFPPCYSWG-----------VCAAIWALVLCHLGLVFGLEAPGTSLGINTPVNGSPVCLEAWDPASAGPARFSLSLLLFFLPLAITAFCFVGCLRALAR-----------GGSLTHRRKLRAAWVAGGALLTLLLCVGPYNASNVASFLYPNLGGSWRKLGLITGAWSVVLNPLVT----------------
34phuA 0.12 0.18 0.88 1.58Download DLPPQLSFGLYVAAFALGFPLNVLAIRGATAHARLRL--TPSAVYALNLGCSDLLLTVSLPLKAVEALASGAWPLPASLCPVFAVAHFAPLYAGGGFLAALSAARYLGAAPP-----CYSWGVCAAIWALVLCHLGLVFGLEAPGG-----WLDHSNTSLGINSPVCLEAWDPASAGPARFSLSLLLFFLPLAITAFCFVGCLRALAR-----------GGSLTHRRKLRAAWVAGGALLTLLLCVGPYNASNVASFLYPNLGGSWRKLGLITGAWSVVLNPLVTGYLG------------
44djh 0.16 0.22 0.95 1.55Download SPAIPVIITAVSVVFVVGLVGNSLVMFVIIRY---TKMKTATNIYIFNLALADALVTT--TMPFQSTVYMNSWPFGDVLCKIVLSIDYYNMFTSIFTLTMMSVYIAVC-HPVKALD--F--RTPLKAKIINICIWLLSSSVGISAIVLGGTKVR-----EDVDVIECSLQFPDDDYDLFMKCVFIFAFVIPVLIIIVCYTLMILRLKSVRLLSGNIGKTAYREKDRNLRRITRLVLVVVAVFVVCWTPIHIFILVEALGS-AALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFDFCFP
54phu 0.13 0.19 0.91 1.25Download MDLPPQLSFGYVAAFALGFPLNVLAIRGATAH--ARLRLTPSAVYALNLGCSDLLLTVS--LPLKAVEALGAWPLPASLCPVFAVAHFAPLYAGGGFLAALSAARYLGAAP------------PCYSWGVCAAIWALVLCHLGLVFGLEAPGGWLDHNTPVNGSPVCLEAWDPASAGPARFSLSLLLFFLPLAITAFCFVGCLRALARGSNIFEMLRIAYGSLTHRRKLRAAWVAGGALLTLLLCVGPYNASNVASFLYPNLGGSWRKLGLITGAWSVVLNPLVTGYLG------------
64grvA 0.09 0.20 0.91 1.52Download IYSKVLVTAIYLALFVVGTVGNSVTLFTLAR----KSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWHPWAFGDAGCRGYYFLRDACTYATALNVASLSVARYLAIC---HPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGL-QNRSADGTHPGGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMS------------GSVQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQHYFYMLTNALAYASSAINPILYNLVSANFRQV------
74djh 0.15 0.22 0.94 1.69Download -PAIPVIITAYSVVFVVGLVGNSLVMFVII---RYTKMKTATNIYIFNLALADALVTT-TMPFQSTVYLMNSWPFGDVLCKIVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPL---KAKIINICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFP-DDDYSWWDLFMKICVFIFAFVIPVLIIIVCYTLMILRLKSVRLLSGNGTWDAYREKDRNLRRITRLVLVVVAVFVVCWTPIHIFILVEALGSA-ALSSYYFCIALGYTNSSLNPILYAFLDENFKR-------
84n6hA 0.17 0.23 0.92 2.19Download LALAIAITALYSAVCAVGLLGNVLVMFGIVRY----TKMKTTNIYIFNLALADALATST-LPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVK---ALDFRTPAKAKLINICIWVLASGVGVPMAVTRPRD----------GAVVCMLQFPSYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSV-----RLLSGS-KEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCR
94grvA 0.11 0.20 0.90 1.32Download IYSKVLVTAIYLALFVVGTVGNSVTLFTLA-----RKSLQTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHAFGDAGCRGYYFLRDACTYATALNVASLSVARYLAIHPFKAK-----LMSRSRTKKFISAIWLASALLAIPMLFTMG--QNRSADGTHPGGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVM------------SGSVQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQHYFYMLTNALAYASSAINPILYNLVSANFRQV------
104ea3A 0.17 0.23 0.90 1.76Download LGLKVTIVGLYLAVCVGGLLGNCLVMYVILR---HTKMKTATNIYIFNLALADTLVLLT--LPFQGTDILLGFWFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP------TSSKA----QAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEI----PTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVR------LLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSVAILRFCTALGYVNSCLNPILYAFLDENFKACF----R
(a)All the residues are colored in black; however, those residues in template which are identical to the residue in the query sequence are highlighted in color. Coloring scheme is based on the property of amino acids, where polar are brightly coloured while non-polar residues are colored in dark shade. (more about the colors used)
(b)Rank of templates represents the top ten threading templates used by GPCR-I-TASSER.
(c)Ident1 is the percentage sequence identity of the templates in the threading aligned region with the query sequence.
(d)Ident2 is the percentage sequence identity of the whole template chains with query sequence.
(e)Cov. represents the coverage of the threading alignment and is equal to the number of aligned residues divided by the length of query protein.
(f)Norm. Z-score is the normalized Z-score of the threading alignments. Alignment with a Normalized Z-score >1 mean a good alignment and vice versa.
(g)Download Align. provides the 3D structure of the aligned regions of the threading templates.
(h)The top 10 alignments reported above (in order of their ranking) are from the following threading programs:
       1: MUSTER   2: FFAS-3D   3: SPARKS-X   4: HHSEARCH2   5: HHSEARCH I   6: Neff-PPAS   7: HHSEARCH   8: pGenTHREADER   9: wdPPAS   10: cdPPAS   

  Top 5 Models Predicted by GPCR-I-TASSER

Generated 3D models Estimated local accuracy of models
  • Download Model 1
  • C-score=-0.26 (Read more about C-score)
  • Estimated TM-score = 0.68±0.12
  • Estimated RMSD = 6.8±4.0Å

  • Download Model 2
  • C-score = -2.51

  • Download Model 3
  • C-score = -2.48

  • Download Model 4
  • C-score = -2.52

  • Download Model 5
  • C-score = -4.67


    • [Click on Q7Z5H5_results.tar.bz2 to download the tarball file including all modeling results listed on this page]