Detailed GPCR-I-TASSER Statistics for Q9NYW6

Submitted Sequence

>sp|Q9NYW6|TA2R3_HUMAN
MMGLTEGVFLILSGTQFTLGILVNCFIELVNGSSWFKTKRMSLSDFIITTLALLRIILLC
IILTDSFLIEFSPNTHDSGIIMQIIDVSWTFTNHLSIWLATCLGVLYCLKIASFSHPTFL
WLKWRVSRVMVWMLLGALLLSCGSTASLINEFKLYSVFRGIEATRNVTEHFRKKRSEYYL
IHVLGTLWYLPPLIVSLASYSLLIFSLGRHTRQMLQNGTSSRDPTTEAHKRAIRIILSFF
FLFLLYFLAFLIASFGNFLPKTKMAKMIGEVMTMFYPAGHSFILILGNSKLKQTFVVMLR
CESGHLKPGSKGPIFS

Predicted Secondary Structure

                  20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220                 240                 260                 280                 300
                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                
Sequence MMGLTEGVFLILSGTQFTLGILVNCFIELVNGSSWFKTKRMSLSDFIITTLALLRIILLCIILTDSFLIEFSPNTHDSGIIMQIIDVSWTFTNHLSIWLATCLGVLYCLKIASFSHPTFLWLKWRVSRVMVWMLLGALLLSCGSTASLINEFKLYSVFRGIEATRNVTEHFRKKRSEYYLIHVLGTLWYLPPLIVSLASYSLLIFSLGRHTRQMLQNGTSSRDPTTEAHKRAIRIILSFFFLFLLYFLAFLIASFGNFLPKTKMAKMIGEVMTMFYPAGHSFILILGNSKLKQTFVVMLRCESGHLKPGSKGPIFS
Prediction CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHSSSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCSSCCCCCCCCCCSSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Conf.Score 9878999999999999999999999999999999992588887889999999998997999877577466314413676412559999999959999999999999856755899869999999753806899999999999999998702020230246656884058776423899999999999999999999999999999999999986288999999981699999999999999999999899999999843667599999999999978885799952874999999999985337466887687889

Predicted Solvent Accessibility

                  20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220                 240                 260                 280                 300
                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                
Sequence MMGLTEGVFLILSGTQFTLGILVNCFIELVNGSSWFKTKRMSLSDFIITTLALLRIILLCIILTDSFLIEFSPNTHDSGIIMQIIDVSWTFTNHLSIWLATCLGVLYCLKIASFSHPTFLWLKWRVSRVMVWMLLGALLLSCGSTASLINEFKLYSVFRGIEATRNVTEHFRKKRSEYYLIHVLGTLWYLPPLIVSLASYSLLIFSLGRHTRQMLQNGTSSRDPTTEAHKRAIRIILSFFFLFLLYFLAFLIASFGNFLPKTKMAKMIGEVMTMFYPAGHSFILILGNSKLKQTFVVMLRCESGHLKPGSKGPIFS
Prediction 7343333311321331233133102200210111004434031011000000212000000123310000000311343200000101112310300000001000000000113110000012304320011013122322313120213132323234343321001203333221011112333333323320331231001002202320243344441131410220010013022113322310220001212343200101011200200230000002214301300120022020203554642247

Predicted Normalized B-Factor


Read more about predicted normalized B-factor

  Top 10 Templates Used by GPCR-I-TASSER


Rank PDB
Hit		Iden1Iden2Cov.Norm.
Z-score		Download
Align.		                   20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220                 240                 260                 280                 300
                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                
Sec.Str
Seq		CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHSSSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCSSCCCCCCCCCCSSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
MMGLTEGVFLILSGTQFTLGILVNCFIELVNGSSWFKTKRMSLSDFIITTLALLRIILLCIILTDSFLIEFSPNTHDSGIIMQIIDVSWTFTNHLSIWLATCLGVLYCLKIASFSHPTFLWLKWRVSRVMVWMLLGALLLSCGSTASLINEFKLYSVFRGIEATRNVTEHFRKKRSEYYLIHVLGTLWYLPPLIVSLASYSLLIFSLGRHTRQMLQNGTSSRDPTTEAHKRAIRIILSFFFLFLLYFLAFLIASFGNFLPKTKMAKMIGEVMTMFYPAGHSFILILGNSKLKQTFVVMLRCESGHLKPGSKGPIFS
14djhA 0.13 0.19 0.89 1.39Download -SPAIPVIITAVYSVVFVVGLVGNSLVMFVIIR----TKMKTATNIYIFNLALADALVTTTMPFQSTVYLMN-SWPFGDVLCKIVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKA----LDFRTPLKAKIINICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMKICVFIFAVIPVLIIIVCYTLMILRLKSVRLLSDR-----------NLRRITRLVLVVVAVFVVCWTPIHIFILVEALGSALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFP---------------
25tjvA 0.12 0.20 0.87 2.67Download LNPSQQLAIAVLSLTLGTFTVLENLLVLCVILHS--RSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDF-HVFHRKDSRNVFLFKLGGVTASFTASVGSLFLAAIDRYISIHRPLAYKRIVTRPK----AVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPH---------IDETYLMFWIGVTSVLLLFIVYAYMYILWKAGKRAMSFSD--------QARMDIRLAKTLVLILVVLIICWGPLLAIMVYDVFGKMKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMF-----------------
34n6hA 0.12 0.17 0.90 2.21Download SSLALAIAITALYSAVCAVGLLGNVLVMFGIVRY---TKMKTATNIYIFNLALADALATST--LPFQSAKYLMETPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKA----LDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQF----PSPSWYWDTVTKICVFLFVVPILIITVCYGLMLLRLRSV-----RLLSGSK-EKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG------------
44ib4 0.15 0.17 0.91 1.55Download EQGNKLHWAALLILMVIIPTIGGNTLVILAVSLE---KKLQYATNYFLMSLAVADLLVGLFVMPIALLTIMFEMWPL-PLVLCAWLFLDVLFSTASIWHLCAISVDRYIAIK---KPIQAN-QYNSRATAFIKITVVWLISIGIAIPVPIKIETN--PNNITCVLTKE-----RFGDFML--FGSLAAFFTPLAIMIVTYFLTIHALQKKAADLEDNWEQKYLQTISNEQRASKVLGIVFFLFLLMWCPFFITNITLVCDNLQMLLEIFVWIGYVSSGVNPLVYTLFNKTFRDAFGRYITCNYR------------
55glh 0.13 0.18 0.87 1.18Download IKETFKYINTVVSCLVFVLGIIGNSTLLYIIYK--------NGPNILIASLALGDLLHIVIAIPINVYKLLAEDWPFGAEMCKLVPFIQKASVGITVLSLCALSIDRYRAVASW--------------WTAVEIVLIWVVSVVLAVPEAIGFDIITMDYKG-SYLRICLLHPVQKAFQFYDWWLFSFYFCLPLAITAFFYTLMTCEMLRKNEGLRLTWDAYLNDHLKQRREVAKTVFCLVLVFALCWLPLHLARILKTLYNNLVLDYIGINMASLNSCANPIALYLVSKRFKNAFKSAL-----------------
64djhA 0.13 0.19 0.88 1.51Download ---AIPVIITAVYSVVFVVGLVGNSLVMFVIIRY---TKMKTATNIYIFNLALADALVTTTMPFQSTVYLMN-SWPFGDVLCKIVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKA----LDFRTPLKAKIINICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDYSWWDLFMKICVFIFAFVIPVLIIIVCYTLMILRLKSVRLLSD-----------RNLRRITRLVLVVVAVFVVCWTPIHIFILVEALGAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFP---------------
73uon 0.10 0.20 0.90 1.70Download -----VVFIVLVAGSLSLVTIIGNILVMVSIKV---NRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTV--EDGECYIQFF---S---NAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINIFAWDAYPPPSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAP-CIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLM----------------
84n6hA 0.13 0.17 0.89 2.75Download --GALAIAITALYSAVCAVGLLGNVLVMFGIVRY---TKMKTATNIYIFNLALADALATST-LPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVK----ALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRD-------GAVVCMLQWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSV------RLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG------------
94djhA 0.14 0.19 0.87 1.57Download -SPAIPVIITAVYSVVFVVGLVGNSLVMFVIIR----TKMKTATNIYIFNLALADALVTTTMPFQSTVYLMN-SWPFGDVLCKIVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKA----LDFRTPLKAKIINICIWLLSSSVGISAIVLGGTKVRE-----DVDVIECSLQSWWDLFMKICVFIFAFVIPVLIIIVCYTLMILRLKSVRLLSD-----------RNLRRITRLVLVVVAVFVVCWTPIHIFILVEALGSALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFP---------------
106b73A 0.13 0.19 0.85 1.53Download ISPAIPVIITAVYSVVFVVGLVGNSLVMFVIIR---YTKMKTATNIYIFNLALADALVTTTMPFQSTVYLMNSWPF-GDVLCKIVLSIDYYNMFTSIFTLTMMSVDRYIAV---CHPVKAPLKAKIINICIWLLSSSVGISAIVLGGTKVRDVIECSLQFPDDDY--------SWWDLFMKICVFIFAFVIPVLIIIVCYTLMILRLK-------SVRSREKD---RNLRRITRLVLVVVAVFVVCWTPIHIFILVEALGTSLSSYYFCIALGYTNSSLNPILYAFLDENFKR-----------------------
(a)All the residues are colored in black; however, those residues in template which are identical to the residue in the query sequence are highlighted in color. Coloring scheme is based on the property of amino acids, where polar are brightly coloured while non-polar residues are colored in dark shade. (more about the colors used)
(b)Rank of templates represents the top ten threading templates used by GPCR-I-TASSER.
(c)Ident1 is the percentage sequence identity of the templates in the threading aligned region with the query sequence.
(d)Ident2 is the percentage sequence identity of the whole template chains with query sequence.
(e)Cov. represents the coverage of the threading alignment and is equal to the number of aligned residues divided by the length of query protein.
(f)Norm. Z-score is the normalized Z-score of the threading alignments. Alignment with a Normalized Z-score >1 mean a good alignment and vice versa.
(g)Download Align. provides the 3D structure of the aligned regions of the threading templates.
(h)The top 10 alignments reported above (in order of their ranking) are from the following threading programs:
       1: MUSTER   2: FFAS-3D   3: SPARKS-X   4: HHSEARCH2   5: HHSEARCH I   6: Neff-PPAS   7: HHSEARCH   8: pGenTHREADER   9: wdPPAS   10: cdPPAS   

  Top 5 Models Predicted by GPCR-I-TASSER

Generated 3D models Estimated local accuracy of models
  • Download Model 1
  • C-score=-0.20 (Read more about C-score)
  • Estimated TM-score = 0.69±0.12
  • Estimated RMSD = 6.7±4.0Å

  • Download Model 2
  • C-score = -2.30

  • Download Model 3
  • C-score = -3.24

  • Download Model 4
  • C-score = -2.87

  • Download Model 5
  • C-score = -3.42


    • [Click on Q9NYW6_results.tar.bz2 to download the tarball file including all modeling results listed on this page]