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I-TASSER I-TASSER-MTD C-I-TASSER QUARK C-QUARK LOMETS COACH COFACTOR MetaGO MUSTER CEthreader SEGMER FG-MD ModRefiner REMO DEMO SPRING COTH Threpp BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign CR-I-TASSER GPCR-I-TASSER MAGELLAN BindProf BindProfX SSIPe ResQ IonCom STRUM DAMpred

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GPCR-RD is a database for experimental restaints of GPCRs. Although no solved X-ray or NMR structure is available for most GPCR sequences, numerous experiments have been performed on GPCRs to identify the critical residues and motifs. Experimental restraints were systematically collected from the literature using an automated text mining algorithm combined with manual validation, with the purpose of assisting GPCR 3-D structure modeling and function annotation. The GPCR-RD data are useful for GPCR 3D structure modeling, such as the GPCR-I-TASSER algorithm. The flow chart below summarizes the procedure for the extraction of experimental data and spatial restraints from literature and other resources.

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11002 entries in GPCR-RD.
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GPCR-RD: GPCR experimental restaint database
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Swiss-Prot ID Experimental Data Swiss-Prot ID Experimental Data Swiss-Prot ID Experimental Data
acm1_human D71N  [Orientation Restraint] acm1_human Y82F  [Orientation Restraint] acm1_human V127A
acm1_human L131A acm1_human L131D acm1_human V173M
acm1_human W209A  [Orientation Restraint] acm1_human I211A acm1_human Y212A
acm1_human E214A acm1_human E216A acm1_human E221A
acm1_human K359A acm1_human E360A acm1_human K361A
acm1_human K362A acm1_human T366A acm1_human N382A  [Orientation Restraint]
acm1_human C417R  [Orientation Restraint] acm1_human C417S  [Orientation Restraint] acm1_rat D122A
acm1_rat D122C acm1_rat D122E acm1_rat D122H
acm1_rat D122K acm1_rat D122L acm1_rat D122N
acm1_rat D122S acm1_rat R123A acm1_rat R123K
acm1_rat Y124C acm1_rat Y124E acm1_rat Y124F
acm1_rat Y124H acm1_rat Y124I acm1_rat Y124M
acm1_rat Y124R acm1_rat Y124W acm1_rat E360A
acm1_rat C391 acm1_rat C435 acm2_human Y177F
acm2_human T190A  [Orientation Restraint] acm2_human V385 acm2_human T386
acm2_human W400A  [Orientation Restraint] acm2_human Y403A  [Orientation Restraint] acm2_human N404A  [Orientation Restraint]
acm2_mouse D97 acm2_mouse G251C acm2_pig A212E
acm2_pig K214A acm3_human S17N acm3_human R133G
acm3_human Y209F acm3_human F210I acm3_human K213T
acm3_human K213V acm3_human P217D acm3_human P217E
acm3_human P218D acm3_human P218E acm3_human F222Y
acm3_human L226F acm3_human E228N acm3_human P229A
acm3_human E257A acm3_human E257P acm3_human T258P
acm3_human D518A acm3_human S519P acm3_human K523N
acm3_human T550A acm3_human T553A acm3_mouse R183C
acm3_mouse F224C acm3_rat N6Q acm3_rat N15Q
acm3_rat N41Q acm3_rat N48Q acm3_rat N52Q
acm3_rat C140 acm3_rat C140A acm3_rat R165A
acm3_rat R165E acm3_rat R165L acm3_rat R165M
acm3_rat R165Q acm3_rat R165W acm3_rat I169C
acm3_rat C220 acm3_rat C220A acm3_rat I253T


Reference:

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