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I-TASSER I-TASSER-MTD C-I-TASSER QUARK C-QUARK LOMETS COACH COFACTOR MetaGO MUSTER CEthreader SEGMER FG-MD ModRefiner REMO DEMO SPRING COTH Threpp BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign CR-I-TASSER GPCR-I-TASSER MAGELLAN BindProf BindProfX SSIPe ResQ IonCom STRUM DAMpred

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GPCR-RD is a database for experimental restaints of GPCRs. Although no solved X-ray or NMR structure is available for most GPCR sequences, numerous experiments have been performed on GPCRs to identify the critical residues and motifs. Experimental restraints were systematically collected from the literature using an automated text mining algorithm combined with manual validation, with the purpose of assisting GPCR 3-D structure modeling and function annotation. The GPCR-RD data are useful for GPCR 3D structure modeling, such as the GPCR-I-TASSER algorithm. The flow chart below summarizes the procedure for the extraction of experimental data and spatial restraints from literature and other resources.

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11002 entries in GPCR-RD.
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GPCR-RD: GPCR experimental restaint database
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Swiss-Prot ID Experimental Data Swiss-Prot ID Experimental Data Swiss-Prot ID Experimental Data
acm3_rat C220 acm3_rat C220A acm3_rat I253T
acm3_rat I253Y acm3_rat Y254 acm3_rat Y254A
acm3_rat Y254C acm3_rat Y254I acm3_rat Y292A
acm3_rat E293A acm3_rat L294A acm3_rat Y307A
acm3_rat R309A acm3_rat H311A acm3_rat F312A
acm3_rat F314A acm3_rat K317A acm3_rat W319A
acm3_rat K320A acm3_rat K484C acm3_rat K484E
acm3_rat E485C acm3_rat K486C acm3_rat K487C
acm3_rat C516A acm3_rat C519A acm3_rat C560S
acm3_rat C562S acm4_human R178C acm4_human P248C
acm4_human L272C acm4_mouse Q61L acm4_xenla V266C
acm5_human R134A acm5_human R134C acm5_human R134D
acm5_human R134E acm5_human R134G acm5_human R134N
acm5_human R134Q acm5_human R134T acm5_human R134V
acm5_human R134X acm5_human Y138A acm5_human Y138C
acm5_human Y138G acm5_human Y138M acm5_human Y138S
acm5_human Y138T acm5_human Y138V acm5_human Y138X
acm5_human R139W acm5_human R142A acm5_human R142C
acm5_human R142D acm5_human R142F acm5_human R142G
acm5_human R142H acm5_human R142L acm5_human R142N
acm5_human R142Q acm5_human R142S acm5_human R142T
acm5_human R142W acm5_human R142X acm5_human I216
acm5_human Y217 acm5_human Y217S acm5_human T220
acm5_human R223 acm5_human R223E acm5_human K439E
acm5_human K439G acm5_human A440E acm5_human A440Q
acm5_human A440T acm5_human A441K acm5_human A441S
acm5_human A441T acm5_mouse Y217S acm5_mouse Y217T
acm5_mouse T220A acm5_mouse T220C acm5_mouse T220F
acm5_mouse T220L acm5_mouse T220S acm5_mouse T220V
acm5_mouse R223E acm5_mouse R223L acm5_mouse R223M
aa1r_human E16A  [Orientation Restraint] aa1r_human C46A  [Orientation Restraint] aa1r_human C46S  [Orientation Restraint]


Reference:

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