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GPCR-RD is a database for experimental restaints of GPCRs. Although no solved X-ray or NMR structure is available for most GPCR sequences, numerous experiments have been performed on GPCRs to identify the critical residues and motifs. Experimental restraints were systematically collected from the literature using an automated text mining algorithm combined with manual validation, with the purpose of assisting GPCR 3-D structure modeling and function annotation. The GPCR-RD data are useful for GPCR 3D structure modeling, such as the GPCR-I-TASSER algorithm. The flow chart below summarizes the procedure for the extraction of experimental data and spatial restraints from literature and other resources.

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11002 entries in GPCR-RD.
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GPCR-RD: GPCR experimental restaint database
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Swiss-Prot ID Experimental Data Swiss-Prot ID Experimental Data Swiss-Prot ID Experimental Data
bkrb2_rat D316K bkrb2_rat D316R bkrb2_rat Y352A
bkrb2_rat Y352F bkrb2_rat Y352S cnr2_human W158A  [Orientation Restraint]
cnr2_human W158F  [Orientation Restraint] cnr2_human W158Y  [Orientation Restraint] cnr2_human C174S
cnr2_human C175S cnr2_human R177S cnr2_human C179S
cnr2_human Y299A  [Orientation Restraint] cnr2_human C313A cnr2_human C320A
fpr1_human D71A  [Orientation Restraint] fpr1_human C98 fpr1_human D122A
fpr1_human R123G fpr1_human C176 fpr1_human R201A
fpr1_human R205A  [Orientation Restraint] fpr1_human T226A fpr1_human K227E
fpr1_human H229A fpr1_human K230Q fpr1_human K235Q
fpr1_human S236A fpr1_human S237G fpr1_human R238G
fpr1_human R241E fpr1_human R309G fpr1_human E310A
fpr1_human R311G cxcr4_human E2A cxcr4_human S5A
cxcr4_human Y7A cxcr4_human D10A cxcr4_human N11A
cxcr4_human N11L cxcr4_human N11Q cxcr4_human Y12A
cxcr4_human T13A cxcr4_human E14A cxcr4_human E15A
cxcr4_human D20 cxcr4_human D20A cxcr4_human Y21
cxcr4_human Y21A cxcr4_human D22 cxcr4_human D22A
cxcr4_human K25A cxcr4_human E26A cxcr4_human C28A
cxcr4_human R30A cxcr4_human E31A cxcr4_human E32A
cxcr4_human K38A cxcr4_human I53L  [Orientation Restraint] cxcr4_human D97A
cxcr4_human D97N cxcr4_human C109A cxcr4_human K110A
cxcr4_human N176A cxcr4_human N176D cxcr4_human N176L
cxcr4_human S178A cxcr4_human E179A cxcr4_human E179Q
cxcr4_human D181A cxcr4_human D181K cxcr4_human D182A
cxcr4_human D182G cxcr4_human D182K cxcr4_human D182N
cxcr4_human R183A cxcr4_human Y184A cxcr4_human I185A
cxcr4_human C186A cxcr4_human D187 cxcr4_human D187A
cxcr4_human D187K cxcr4_human D187S cxcr4_human D187V
cxcr4_human R188 cxcr4_human R188A cxcr4_human F189
cxcr4_human F189A cxcr4_human Y190 cxcr4_human Y190A
cxcr4_human N192D cxcr4_human D193 cxcr4_human D193A


Reference:

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