QUARK Ab Initio Results for YOJO_ECOLI


  Submitted Primary Sequence

>Length 54
MHTPIGVKPVAGSKEWREAWQKRAFAHISNGYKYIYIAIDSPEIFLLVCSLIRI
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--------10--------20--------30--------40--------50
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MHTPIGVKPVAGSKEWREAWQKRAFAHISNGYKYIYIAIDSPEIFLLVCSLIRI
CCCCCCCCTTTTCHHHHHHHHHHHHHHHHCCCCEEEETTTTHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MHTPIGVKPVAGSKEWREAWQKRAFAHISNGYKYIYIAIDSPEIFLLVCSLIRI
552222232221233012101210011023012000000201200110020122
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--------10--------20--------30--------40--------50
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.625 to 1v4yA
SCOP code=b.92.1.6
TM-score=0.514 to 2ojeD
SCOP code=a.202.1.1
TM-score=0.557 to 1v4yA
SCOP code=b.92.1.6
TM-score=0.598 to 1sgjA
SCOP code=c.1.12.5
TM-score=0.508 to 3bzkA
SCOP code=a.60.2.6
Estimated TM-score of Model 1: 0.5251 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.5756 ±0.0778