Template-based Modeling Results for TISB_ECOLI


  Submitted Primary Sequence

>Length 29
MNLVDIAILILKLIVAALQLLDAVLKYLK
12345678901234567890123456789
--------10--------20
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNLVDIAILILKLIVAALQLLDAVLKYLK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNLVDIAILILKLIVAALQLLDAVLKYLK
42020001000100000020021013215
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--------10--------20
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNLVDIAILILKLIVAALQLLDAVLKYLK
1SPARKS1qovh20.2000.8621.277threading_1-DLASLAIYSFWIFLAGLIYYLQTEN---
2PPA-I1spfA0.1790.9661.164threading_2VNLKRLLVVVVVVVLVVVVIVGALLMGL-
3SP31jb0m0.3600.8621.099threading_3MALTDTQVYVALVIA----LLPAVLAFRL
4SPARKS3qf7d0.2411.0001.188threading_4LDYFELFKEYLKKHEKLLKILDELLDEVK
5PPA-I2kixA0.2071.0001.085threading_5MLEPFQILSISSFILSALHFIAWTIGHLN
6SP31qovh20.2000.8621.080threading_6-DLASLAIYSFWIFLAGLIYYLQTEN---
7SPARKS1ld4e0.1480.9311.175threading_7--MKQLEDKVEELLSKNYHLENEVARLKK
8PPA-I3htuD0.2411.0001.042threading_8VTEQDKAILQLKQQRDKLRQYQKRIAQQL
9SP33qf7d0.2411.0001.060threading_9LDYFELFKEYLKKHEKLLKILDELLDEVK
10SPARKS1rh5c0.1381.0001.175threading_10FSKIRVKPEHVIGVTVAFVIIEAILTYGR

  Predicted Tertiary Structure

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TM-score=0.629 to 1r48A
SCOP code=h.4.15.1
TM-score=0.680 to 1spfA
SCOP code=j.35.1.1
TM-score=0.478 to 5znfA
SCOP code=g.37.1.1
TM-score=0.528 to 1vrgA
SCOP code=c.14.1.4
TM-score=0.701 to 1gk7A
SCOP code=h.1.20.1