Template-based Modeling Results for FEPD_ECOLI

Submitted Primary Sequence

>Length 334
MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAFSGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAAVLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALNSLSLGSDTATALGSRVARTQLIGLLAITVLCGSATAIVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAPVLIFLVRRKTRGGA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAFSGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAAVLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALNSLSLGSDTATALGSRVARTQLIGLLAITVLCGSATAIVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAPVLIFLVRRKTRGGA
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAFSGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAAVLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALNSLSLGSDTATALGSRVARTQLIGLLAITVLCGSATAIVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAPVLIFLVRRKTRGGA
5401111020000000000000000000010132010110020001223211000001000010000000000000000001101312202100000000000000000000010111010000000000000000000222223111110000000000002000100100123001200000000032220310100000000000000000110100100120031010302201100100000000000010010000000000001100112121000000000000000000002000212020000000000000000023324234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAFSGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAAVLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALNSLSLGSDTATALGSRVARTQLIGLLAITVLCGSATAIVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAPVLIFLVRRKTRGGA
1	MUSTER	2nq2A	0.307	0.916	3.690	threading_1	--------YPKILFGLTLLLVITAVISLGIGRYSLS--------VPQIDPVQQQVIFQVRLPRILTALCVGAGLALSGVVLQGIFRNPLVNPHIIGVTSGSAFGGTLAIFFGF--SLYGLFTSTILFGFGTLALVFLFS-----FKSLLMLILIGMILSGLFSALVSLLQYISDEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSILLSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISGSIGWVGLIIPHLSRMLVGANHQSLLPCTMLVGATYMLLVDNVARSLSDAEIPISILTALIGAPLFGVLVYKL-----
2	SPARKS	2nq2a	0.307	0.916	8.948	threading_2	--------YPKILFGLTLLLVITAVISLGIGRYSLS--------VPQIDPVQQQVIFQVRLPRILTALCVGAGLALSGVVLQGIFRNPLVNPHIIGVTSGSAFGGTLAIFFGFSLYGLFTSTILFGFGTLALVFLFS-------FKSLLMLILIGMILSGLFSALVSLLQYISDEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSILLSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISGSIGWVGLIIPHLSRMLVGANHQSLLPCTMLVGATYMLLVDNVARSLSDAEIPISILTALIGAPLFGVLVYKL-----
3	PROSPECT2	2nq2A	0.307	0.916	4.187	threading_3	YP--------KILFGLTLLLVITAVISLGIGRYSLS--------VPQIDPVQQQVIFQVRLPRILTALCVGAGLALSGVVLQGIFRNPLVNPHIIGVTSGSAFGGTLAIFFGF--SLYGLFTSTILFGFGTLALVFLFS-----FKSLLMLILIGMILSGLFSALVSLLQYITEEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSILLSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISGSIGWVGLIIPHLSRMLVGANHQSLLPCTMLVGATYMLLVDNVARSLSDAEIPISILTALIGAPLFGVLVYK-----L
4	PPA-I	2nq2A	0.307	0.916	7.639	threading_4	--------YPKILFGLTLLLVITAVISLGIGRYSLS--------VPQIDPVQQQVIFQVRLPRILTALCVGAGLALSGVVLQGIFRNPLVNPHIIGVTSGSAFGGTLAIFFGF--SLYGLFTSTILFGFGTLALVFLFSF-----KSLLMLILIGMILSGLFSALVSLLQYISDEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSILLSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISGSIGWVGLIIPHLSRMLVGANHQSLLPCTMLVGATYMLLVDNVARSLSDAEIPISILTALIGAPLFGVLVYKL-----
5	HHPRED-l	2nq2_A	0.310	0.916	9.480	threading_5	--------YPKILFGLTLLLVITAVISLGIGRYSLSVPQI--------DPVQQQVIFQVRLPRILTALCVGAGLALSGVVLQGIFRNPLVNPHIIGVTSGSAFGGTLAIFF-GF-SLYGLFTSTILFGFGTLALVFLFSFK-----SLLMLILIGMILSGLFSALVSLLQYIDEEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSILLSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISGSIGWVGLIIPHLSRMLVGANHQSLLPCTMLVGATYMLLVDNVARSLSDAEIPISILTALIGAPLFGVLVYKL-----
6	HHPRED-g	2nq2_A	0.311	0.913	8.351	threading_6	--------YPKILFGLTLLLVITAVISLGIGRYSLSVPQI---------PVQQQVIFQVRLPRILTALCVGAGLALSGVVLQGIFRNPLVNPHIIGVTSGSAFGGTLAIFF-G-FSLYGLFTSTILFGFGTLALVFLFSFK-----SLLMLILIGMILSGLFSALVSLLQYISEEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSILLSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISGSIGWVGLIIPHLSRMLVGANHQSLLPCTMLVGATYMLLVDNVARSLSDAEIPISILTALIGAPLFGVLVYKL-----
7	SP3	2nq2a	0.307	0.916	8.483	threading_7	--------YPKILFGLTLLLVITAVISLGIGRYSLSVPQI--------DPVQQQVIFQVRLPRILTALCVGAGLALSGVVLQGIFRNPLVNPHIIGVTSGSAFGGTLAIFFGF--SLYGLFTSTILFGFGTLALVFLFS-----FKSLLMLILIGMILSGLFSALVSLLQYISDEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSILLSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISGSIGWVGLIIPHLSRMLVGANHQSLLPCTMLVGATYMLLVDNVARSLSDAEIPISILTALIGAPLFGVLVYKL-----
8	SAM-T99	2nq2A	0.307	0.916	7.523	threading_8	--------YPKILFGLTLLLVITAVISLGIGRYSLSVPQI--------DPVQQQVIFQVRLPRILTALCVGAGLALSGVVLQGIFRNPLVNPHIIGVTSGSAFGGTLAIFF--GFSLYGLFTSTILFGFGTLALVFLFS-----FKSLLMLILIGMILSGLFSALVSLLQYITEEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSILLSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISGSIGWVGLIIPHLSRMLVGANHQSLLPCTMLVGATYMLLVDNVARSLSDAEIPISILTALIGAPLFGVLVYKL-----
9	MUSTER	1l7vA	0.339	0.928	3.229	threading_9	LTARQQQRQNIRWLLCLSVLLLALLLSLCAGEQWISP-------GDWFTPRGELFVWQIRLPRTLAVLLVGAALAISGAV-QALFENPLAEPGLLGVSNGAGVGLIAAVLLGQQLPNWALGLCAIAGALIITLILLRFAR---RHLSTSRLLLAGVALGIICSALTWAIYFSTS---VDLRQLYWGGFGGVDWRQSWLLAL----IPVLLWICCQSRPNLALGEISARQLGLP-LWFWRNVLVAATGWVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLLPGCALAGASALLLADIVARLALAAELPIGVVTATLGAPVFIWLLLKA-----
10	SPARKS	1l7va	0.330	0.925	8.144	threading_10	LA-RQQQRQNIRWLLCLSVLLLALLLSLCAGEQWISPGDW-------FTPRGELFVWQIRLPRTLAVLLVGAALAISGA-VQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQQLPNWALGLCAIAGALIITLILLRFAR---RHLSTSRLLLAGVALGIICSALTWAIYFSTSVDLRQ---LYWGGFGGVDWRQSWLLA----LIPVLLWICCQSRPNLALGEISARQLGLPLWFWRNVLVAATG-WVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLLPGCALAGASALLLADIVARLALAAELPIGVVTATLGAPVFIWLLLKA-----

Predicted Tertiary Structure


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TM-score=0.822 to 1l7vA SCOP code=f.22.1.1	TM-score=0.826 to 1l7vA SCOP code=f.22.1.1	TM-score=0.830 to 1l7vA SCOP code=f.22.1.1	TM-score=0.811 to 1l7vA SCOP code=f.22.1.1	TM-score=0.826 to 1l7vA SCOP code=f.22.1.1