Template-based Modeling Results for SYGA_ECOLI


  Submitted Primary Sequence

>Length 303
MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTCLRELGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSLKELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCNKDK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTCLRELGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSLKELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCNKDK
CCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEECCEEEEEEEHHHEECCEECCCCEEEHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTCLRELGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSLKELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCNKDK
554242321200000012002521000021011220101100100021012210200102112212213114112101201101000211233002000100330111122230100223131111002010010001002001000111013020310101011001000000220300010211311212010000012211110211032010310120022013102201203230100001100100000100113400112212300010120031004001201331212214448
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTCLRELGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSLKELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCNKDK
1MUSTER1j5wB0.6030.8983.797threading_1--------YLQDVIKLNDFWASKGCLLEQPYD-EVGAGTFHPATFFGSLRKGPWKVAYVQPSRRPTDGRYGENPNRLQRYFQYQVIIKPSPENSQELYLESLEYLGIK--EHDIRFVEDNWESPTLGAWGVGWEVWLDG-EITQFTYFQQIGGISLKDIPLEITYGLERIA-YLQGVDNVYEVQWNEN----VKYGDVFLENEREFSVFNFEEANVGLLFRHFDEYEKEFYRLVE--KNLYLPAYDYILKCSHTFNLLDARGAISVSQRQTYVKRIQAARKAARVFLEVQA------------
2SPARKS1j5wa0.5810.8918.927threading_2--------YLQDVIKLNDFWASKGCLLEQPYD-EVGAGTFHPATFFGSLRKGPWKVAYVQPSRRPT-----ENPNRLQRYFQYQVIIKPSPENSQELYLESLEYLGINLKEHDIRFVEDNWESPTLGAWGVGWEVWLDG-EITQFTYFQQIGGISLKDIPLEITYGLERI-AYLQGVDNVYEVQWNEN----VKYGDVFLENEREFSVFNFEEANVGLLFRHFDEYEKEFYRLVE--KNLYLPAYDYILKCSHTFNLLDARGAISVSQRQTYVKRIQA-ARKAARVFLEVQAN----------
3PROSPECT23rf1A0.6370.9374.590threading_3NLYFQSNATFSQILNLQNYWQEQGCAI-QPYD-PAGAGTFHPATFLRSLGKKPWAAAYVAPSRRPTDGRYGENPNRLGAYYQFQVLIKPSPDNIQELYLKSLENLGFDLKSHDIRFVEDNWESPSLGAWGLGWEVWLDG-EVTQFTYFQQVGGIAVDLVSAEITYGLERIA-YLQNVDNVYDIVWSEFNGEKIKYADVHKQSEYEFSKYNFEVSDVKILNEQFENSYKECKNIL--EQGLALPAYDYCL-AAHTFNLLDARGAISVAQRQDYL-KIRELSKNCAEIYKKNL-----------N
4PPA-I1j5wB0.6030.8988.639threading_4--------YLQDVIKLNDFWASKGCLLEQPYD-EVGAGTFHPATFFGSLRKGPWKVAYVQPSRRPTDGRYGENPNRLQRYFQYQVIIKPSPENSQELYLESLEYLGIK--EHDIRFVEDNWESPTLGAWGVGWEVWLDG-EITQFTYFQQIGGISLKDIPLEITYGLERIA-YLQGVDNVYEVQWNEN----VKYGDVFLENEREFSVFNFEEANVGLLFRHFDEYEKEFYRLVE--KNLYLPAYDYILKCSHTFNLLDARGAISVSQRQTYVKRIQAARKAARVFLEVQA------------
5HHPRED-l1j5w_A0.5960.8915.281threading_5-------YLQDVI-KLNDFWASKGCLLEQPYD-EVGAGTFHPATFFGSLRKGPWKVAYVQPSRRPT-----ENPNRLQRYFQYQVIIKPSPENSQELYLESLEYLGINLKEHDIRFVEDNWESPTLGAWGVGWEVWLDG-EITQFTYFQQIGGISLKDIPLEITYGLERIA-YLQGVDNVYEVQWNEN----VKYGDVFLENEREFSVFNFEEANVGLLFRHFDEYEKEFYRLV--EKNLYLPAYDYILKCSHTFNLLDARGAISVSQRQTYVKRIQA-ARKAARVFLEVQAN----------
6HHPRED-g1j5w_A0.5960.8915.133threading_6-------YLQDVI-KLNDFWASKGCLLEQPYD-EVGAGTFHPATFFGSLRKGPWKVAYVQPSRRPT-----ENPNRLQRYFQYQVIIKPSPENSQELYLESLEYLGINLKEHDIRFVEDNWESPTLGAWGVGWEVWLDG-EITQFTYFQQIGGISLKDIPLEITYGLERIA-YLQGVDNVYEVQWNEN----VKYGDVFLENEREFSVFNFEEANVGLLFRHFDEYEKEFYRLV--EKNLYLPAYDYILKCSHTFNLLDARGAISVSQRQTYVKRIQA-ARKAARVFLEVQAN----------
7SP31j5wa0.5810.8918.579threading_7--------YLQDVIKLNDFWASKGCLLEQPYD-EVGAGTFHPATFFGSLRKGPWKVAYVQPSRRPT-----ENPNRLQRYFQYQVIIKPSPENSQELYLESLEYLGINLKEHDIRFVEDNWESPTLGAWGVGWEVWLDG-EITQFTYFQQIGGISLKDIPLEITYGLERI-AYLQGVDNVYEVQWNEN----VKYGDVFLENEREFSVFNFEEANVGLLFRHFDEYEKEFYRLVE--KNLYLPAYDYILKCSHTFNLLDARGAISVSQRQTYVKRIQ-AARKAARVFLEVQAN----------
8SAM-T991j5wB0.6100.8987.280threading_8-------YLQDVI-KLNDFWASKGCLLEQPYD-EVGAGTFHPATFFGSLRKGPWKVAYVQPSRRPTDGRYGENPNRLQRYFQYQVIIKPSPENSQELYLESLEYLGI--KEHDIRFVEDNWESPTLGAWGVGWEVWLDG-EITQFTYFQQIGGISLKDIPLEITYGLERIA-YLQGVDNVYEVQWNE----NVKYGDVFLENEREFSVFNFEEANVGLLFRHFDEYEKEFYRLV--EKNLYLPAYDYILKCSHTFNLLDARGAISVSQRQTYVKRIQA-ARKAARVFLEVQA-----------
9MUSTER3rf1A0.6150.9343.645threading_9LYFQSNATFS-QILNLQNYWQEQGCAI-QPYD-PAGAGTFHPATFLRSLGKKPWAAAYVAPSRRPTDGRYGENPNRLGAYYQFQVLIKPSPDNIQELYLKSLENLGFDLKSHDIRFVEDNWESPSLGAWGLGWEVWLDG-EVTQFTYFQQVGGIAVDLVSAEITYGLERIA-YLQNVDNVYDIVWSEFNGEKIKYADVHKQSEYEFSKYNFEVSDVKILNEQFENSYKECKNILE--QGLAL-PAYDYCLAAHTFNLLDARGAIS-VAQRQDYLKIRELSKNCAEIYKKNLN-----------
10SPARKS2ztga0.1820.9441.069threading_10NPVFKKPFELDEREYYLNFFERRGHGRIERYPVVTIASDFQPFVTSGVAPPPANPLTISQPCIRLDDGRYPGKEI----YWK---------NETVAYCTELLNELGVKKE--DIVYKEEPWAGG--GNAGPCLEAIVGGLEVATLVFNLEIKGARYRDNYIVDTYGLERFVWASKGTPTVYDAIFPEIDNSNVSFNERVRRIVAESSKLGIGELRGERLNQLRKSVADTVGVSVEELEGIVVPLEKVYSLADHTRCIFLGDGLVPSNAGAGYLARIRRSLRLAEELLYDLVEHKKGFEFDVPL

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.946 to 1j5wB
SCOP code=d.104.1.1
TM-score=0.928 to 1j5wB
SCOP code=d.104.1.1
TM-score=0.923 to 1j5wB
SCOP code=d.104.1.1
TM-score=0.924 to 1j5wB
SCOP code=d.104.1.1
TM-score=0.946 to 1j5wB
SCOP code=d.104.1.1