Home Research Services Publications People Teaching Job Opening Facilities News Forum Lab Only
Online Services

I-TASSER QUARK LOMETS COACH COFACTOR MetaGO MUSTER SEGMER FG-MD ModRefiner REMO DEMO SPRING COTH BSpred SVMSEQ ANGLOR BSP-SLIM SAXSTER ThreaDom ThreaDomEx EvoDesign GPCR-I-TASSER BindProf BindProfX ResQ IonCom STRUM DAMpred

TM-score TM-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR NeBcon WDL-RF ATPbind DockRMSD

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP TM-fold DECOYS POTENTIAL RW/RWplus HPSF THE-DB CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13

Download and install SEGMER


Back to the SEGMER homepage.

To install SEGMER in your computer, you need to do following:

1.Download file SEGMER_source.tar.bz2 and decompress the file by
    > tar -jxvf SEGMER_source.tar.bz2

2.Download library and cp it into "XXXX/SEGMER_source/library" diretory(see readme.txt in details).

The template library files can be downloaded at http://zhanglab.ccmb.med.umich.edu/library. Please read the brief readme file with regard to how to run the SEGMER program.


References:
S. Wu, Y. Zhang. SEGMER:identifying protein sub-structural similarity by segmental threading. Structure, 2010 18: 858-867 (download the PDF file).

yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218