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Download and install SVMSEQ


You can download SVMSEQ programs at this page. Due to the big big size of sequence database, we split the compressed file into 16 separate files each with about 100M. To install SVMSEQ in your computer, you need to do following:

1. Download all the files one by one ( Please DON'T attempt to download all the files at the same time which may result in crash of the network connections)
2. Combine 16 files into one, i.e. run following command in linux:
    > cat SVMSEQ_source.tar.bz2.* > SVMSEQ_source.tar.bz2
3. Decompress the file by
    > tar -jxvf SVMSEQ_source.tar.bz2

Please read the brief readme file with regard to how to run the SVMSEQ program.

Index File name
1 SVMSEQ_source.tar.bz2.aa
2 SVMSEQ_source.tar.bz2.ab
3 SVMSEQ_source.tar.bz2.ac
4 SVMSEQ_source.tar.bz2.ad
5 SVMSEQ_source.tar.bz2.ae
6 SVMSEQ_source.tar.bz2.af
7 SVMSEQ_source.tar.bz2.ag
8 SVMSEQ_source.tar.bz2.ah
9 SVMSEQ_source.tar.bz2.ai
10 SVMSEQ_source.tar.bz2.aj
11 SVMSEQ_source.tar.bz2.ak
12 SVMSEQ_source.tar.bz2.al
13 SVMSEQ_source.tar.bz2.am
14 SVMSEQ_source.tar.bz2.an
15 SVMSEQ_source.tar.bz2.ao
16 SVMSEQ_source.tar.bz2.ap


References:
S. Wu, Y. Zhang. A comprehensive assessment of sequence-based and template-based methods for protein contact prediction. Bioinformatics, vol 24, 924-931 (2008). (download the PDF file)

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