When I ran the following command, it gave an error though I provide the complex.
$ ./get_final_score.py data
step 1: iAlign
~/BindProfX/bin/XBindProf/ialign/ialign.pl -a 2 -n ave -s -minp 7 -mini 7 -dc 4.5 -e is -w ~/iDEGauto/BindProfX/bin/XBindProf/lib -l ~/BindProfX/bin/XBindProf/lib/dimer.list X_Zy0NbL9IeO5BJbUq.pdb >X_Zy0NbL9IeO5BJbUq.ial
~/BindProfX/bin/XBindProf/ialign//extint: ~/BindProfX/bin/XBindProf/ialign//extint: cannot execute binary file
Error: extraction of interfaces failed
can't open intface pdb file at ~/BindProfX/bin/XBindProf/run_align.pl line 82.
Traceback (most recent call last):
File "./get_final_score.py", line 357, in
get_final_score(os.path.abspath(arg))
File "./get_final_score.py", line 259, in get_final_score
shutil.copy(align_tmp,align_file)
File "/usr/local/lib/python2.7/shutil.py", line 119, in copy
copyfile(src, dst)
File "/usr/local//lib/python2.7/shutil.py", line 82, in copyfile
with open(src, 'rb') as fsrc:
IOError: [Errno 2] No such file or directory: '/tmp/codelife/data/align.out'