Dear all,
Error occurs when doing threading process, looking forward for your reply.
1. make seq.txt and rmsinp
Your protein contains 182 residues:
> seq
SMAAIRKKLVIVGDVACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD
TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKK
DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL
QA
2.1 run Psi-blast
2.2 Predict secondary structure with PSSpred...
2.3 Predict solvent accessibility...
2.4 run pairmod
2.4.1 Use all templates
2.4.2 running pair ................
FORTRAN STOP
30000 6379375 total lib str & residues
number of observations 23.72064 2357168.
pair done
3.1 do threading
start serial threading PPAS
/tmp/hyb/ITseq
/home/hyb/Dyphen/data/PPAS_seq
open: No such file or directory
apparent state: unit 30 named /home/hyb/Dyphen/I-TASSER4.0/ITLIB/summary/AAA.sec
last format: list io
lately reading sequential formatted external IO
Illegal division by zero at /home/hyb/Dyphen/data/PPAS_seq line 354.
hostname: hyb-ThinkPad-T410
starting time: 2014骞?08?04妤 骀涓 10:47:28 CST
pwd: /tmp/hyb/ITseq
running zalign .....
start serial threading dPPAS
/tmp/hyb/ITseq
/home/hyb/Dyphen/data/dPPAS_seq
At line 273 of file ppa1.f
Fortran runtime error: No such file or directory
Illegal division by zero at /home/hyb/Dyphen/data/dPPAS_seq line 356.
hostname: hyb-ThinkPad-T410
starting time: 2014骞?08?04妤 骀涓 10:47:32 CST
pwd: /tmp/hyb/ITseq
running zalign .....
start serial threading dPPAS2
/tmp/hyb/ITseq
/home/hyb/Dyphen/data/dPPAS2_seq
At line 273 of file ppa1.f
Fortran runtime error: No such file or directory
Illegal division by zero at /home/hyb/Dyphen/data/dPPAS2_seq line 355.
hostname: hyb-ThinkPad-T410
starting time: 2014骞?08?04妤 骀涓 10:47:34 CST
pwd: /tmp/hyb/ITseq
running zalign .....
start serial threading Env-PPAS
/tmp/hyb/ITseq
/home/hyb/Dyphen/data/Env-PPAS_seq
At line 284 of file zal3.f
Fortran runtime error: No such file or directory
Illegal division by zero at /home/hyb/Dyphen/data/Env-PPAS_seq line 352.
hostname: hyb-ThinkPad-T410
starting time: 2014骞?08?04妤 骀涓 10:47:37 CST
pwd: /tmp/hyb/ITseq
running zalign .....
start serial threading MUSTER
/tmp/hyb/ITseq
/home/hyb/Dyphen/data/MUSTER_seq
can't open model file /home/hyb/Dyphen/I-TASSER4.0/ITLIB/summary/modelpsi_0.005_1.dat
can't open model file /home/hyb/Dyphen/I-TASSER4.0/ITLIB/summary/modelphi_0.005_1.dat
At line 522 of file zal33.f
Fortran runtime error: End of file
Illegal division by zero at /home/hyb/Dyphen/data/MUSTER_seq line 599.
hostname: hyb-ThinkPad-T410
starting time: 2014骞?08?04妤 骀涓 10:47:39 CST
pwd: /tmp/hyb/ITseq
running Psi-blast .....
running zalign .....
start serial threading wPPAS
/tmp/hyb/ITseq
/home/hyb/Dyphen/data/wPPAS_seq
Exception in thread "main" java.io.FileNotFoundException: /home/hyb/Dyphen/I-TASSER4.0/ITLIB/summary/AAA.seq (娌℃椋涓浠舵珏?
at java.io.FileInputStream.open(Native Method)
at java.io.FileInputStream.(Unknown Source)
at java.io.FileInputStream.(Unknown Source)
at java.io.FileReader.(Unknown Source)
at d.a(d.java)
at d.main(d.java)
Illegal division by zero at /home/hyb/Dyphen/data/wPPAS_seq line 340.
hostname: hyb-ThinkPad-T410
starting time: 2014骞?08?04妤 骀涓 10:52:22 CST
pwd: /tmp/hyb/ITseq
running Psi-blast .....
start serial threading wdPPAS
/tmp/hyb/ITseq
/home/hyb/Dyphen/data/wdPPAS_seq
Exception in thread "main" java.io.FileNotFoundException: /home/hyb/Dyphen/I-TASSER4.0/ITLIB/summary/AAA.seq (娌℃椋涓浠舵珏?
at java.io.FileInputStream.open(Native Method)
at java.io.FileInputStream.(Unknown Source)
at java.io.FileInputStream.(Unknown Source)
at java.io.FileReader.(Unknown Source)
at c.a(c.java)
at c.main(c.java)
Illegal division by zero at /home/hyb/Dyphen/data/wdPPAS_seq line 348.
hostname: hyb-ThinkPad-T410
starting time: 2014骞?08?04妤 骀涓 11:03:30 CST
pwd: /tmp/hyb/ITseq
running Psi-blast .....
start serial threading wMUSTER
/tmp/hyb/ITseq
/home/hyb/Dyphen/data/wMUSTER_seq
can't open model file /home/hyb/Dyphen/I-TASSER4.0/ITLIB/summary/modelpsi_0.005_1.dat
can't open model file /home/hyb/Dyphen/I-TASSER4.0/ITLIB/summary/modelphi_0.005_1.dat
Exception in thread "main" java.io.FileNotFoundException: /home/hyb/Dyphen/I-TASSER4.0/ITLIB/summary/AAA.seq (娌℃椋涓浠舵珏?
at java.io.FileInputStream.open(Native Method)
at java.io.FileInputStream.(Unknown Source)
at java.io.FileInputStream.(Unknown Source)
at java.io.FileReader.(Unknown Source)
at e.a(e.java)
at e.main(e.java)
Illegal division by zero at /home/hyb/Dyphen/data/wMUSTER_seq line 570.
hostname: hyb-ThinkPad-T410
starting time: 2014骞?08?04妤 骀涓 11:14:41 CST
pwd: /tmp/hyb/ITseq
running Psi-blast .....
running Psi-blast .....
only 0 threading programs have output, please check threading programs.
Best Regards!