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GPCR

Name5-hydroxytryptamine receptor 1B
SpeciesHomo sapiens (Human)
GeneHTR1B
Synonym5-HT1B receptor
5-HT-1B
5-HT-1D-beta
5-HT1B
Serotonin 1D beta receptor
[ Show all ]
DiseaseChronic schizophrenics
Major depressive disorder
Migraine headaches
Mood disorder
Psychotic disorders
[ Show all ]
Length390
Amino acid sequenceMEEPGAQCAPPPPAGSETWVPQANLSSAPSQNCSAKDYIYQDSISLPWKVLLVMLLALITLATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQVVCDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISISLPPFFWRQAKAEEEVSECVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRILKQTPNRTGKRLTRAQLITDSPGSTSSVTSINSRVPDVPSESGSPVYVNQVKVRVSDALLEKKKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDACWFHLAIFDFFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFKCTS
UniProtP28222
Protein Data Bank4iar, 6g79, 5v54
GPCR-HGmod modelP28222
3D structure modelThis structure is from PDB ID 4iar.
BioLiPBL0239857, BL0403524,BL0403525, BL0417722
Therapeutic Target DatabaseT07806
ChEMBLCHEMBL1898
IUPHAR2
DrugBankBE0000797

Ligand

Name148672-13-3
Molecular formulaC29H31N5O3
IUPAC nameN-[4-methoxy-3-(4-methylpiperazin-1-yl)phenyl]-4-[2-methyl-4-(5-methyl-1,2,4-oxadiazol-3-yl)phenyl]benzamide
Molecular weight497.599
Hydrogen bond acceptor7
Hydrogen bond donor1
XlogP4.9
Synonyms(1,1'-Biphenyl)-4-carboxamide, N-(4-methoxy-3-(4-methyl-1-piperazinyl)phenyl)-2'-methyl-4'-(5-methyl-1,2,4-oxadiazol-3-yl)-
01,1'-Biphenyl-4-carboxamide, N-04-methoxy-3-((4-methyl-1-piperazinyl)phenyl)-2'-methyl-4'-(5-methyl-1,2,4-oxadiazol-3-yl)-
2'-Methyl-4'-(5-methyl-(1,2,4)-oxadiazol-3-yl)biphenyl-4-carboxylic acid (4-methoxy-3-(4-methylpiperazin-1-yl)phenyl)amide
2LLH6CEB40
AC-27423
[ Show all ]
Inchi KeyYDBCEBYHYKAFRX-UHFFFAOYSA-N
Inchi IDInChI=1S/C29H31N5O3/c1-19-17-23(28-30-20(2)37-32-28)9-11-25(19)21-5-7-22(8-6-21)29(35)31-24-10-12-27(36-4)26(18-24)34-15-13-33(3)14-16-34/h5-12,17-18H,13-16H2,1-4H3,(H,31,35)
PubChem CID107780
ChEMBLCHEMBL15928
IUPHAR14
BindingDB79215
DrugBankN/A

Structure

SDF download

2D structure
Lipinski's druglikenessThis ligand satisfies Lipinski's rule of five.

Experimental Data

ParameterValueReferenceDatabase source
IA0.47 -PMID15887956ChEMBL
Intrinsic activity0.3 -PMID17629698ChEMBL
Intrinsic activity0.64 %PMID9548813ChEMBL
Ki0.14 nMPMID16143528, PMID9397179, Bioorg. Med. Chem. Lett., (1997) 7:24:3183PDSP,ChEMBL
Ki0.14 nM, PMID16143528BindingDB
Ki0.158489 - 1.0 nMPMID9397179, PMID9303567, PMID9776361, PMID8957260, PMID9548813IUPHAR
Ki0.43 nMPMID9303569PDSP,BindingDB
Ki0.630957 nMPMID10513577IUPHAR
Ki0.93 nMPMID9776361PDSP,BindingDB
Ki1.0 nMPMID9548813, PMID9303567PDSP,BindingDB,ChEMBL
Ki1.25 nMPMID8788495PDSP
Ki1.3 nMPMID9303569PDSP,BindingDB
Ki4.3 nMPMID16143528BindingDB
Ki4.31 nMPMID16143528PDSP,ChEMBL
Ki7.94 nMPMID9303567PDSP,BindingDB
Simulation143.0 %PMID9548813ChEMBL

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