We had to restart the proces (due to system reboot). We were at step 2.4.2
None of the files described above was already present in the results folder
These are the filenames that were present:
blast.out
exp.data
mtx
psitmp.chk
pssm.txt
rmsinp
seq.dat
seq.fasta
seq.ss
seq.txt
However when we start the job again we get the following message:
Your setting is:
-libdir =/home/ngs/itasser
-seqname =SCN5A_WT
-datadir =/home/ngs/nexus/itasser/scn5a
-usrname =dorien
-runstyle =parallel
-idcut =1
-ntemp =20
-nmodel =5
1. make seq.txt and rmsinp
error: without /home/ngs/nexus/itasser/scn5a/seq.fasta
rm: cannot remove â/home/ngs/nexus/itasser/scn5a/tra*.*â: No such file or directory
dorien@cr28603:/home/ngs/itasser/I-TASSERmod>
Any idea what the problem is?