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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 112 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1iw7:A (2.6) BS01 MG 2.7.7.6 GO:0000428 ... Q9Z9H6 12000971
    2 1iw7:A (2.6) BS02 MG 2.7.7.6 GO:0000428 ... Q9Z9H6 12000971
    3 1iw7:A (2.6) BS03 MG 2.7.7.6 GO:0000428 ... Q9Z9H6 12000971
    4 1iw7:A (2.6) BS04 MG 2.7.7.6 GO:0000428 ... Q9Z9H6 12000971
    5 1iw7:A (2.6) BS05 MG 2.7.7.6 GO:0000428 ... Q9Z9H6 12000971
    6 1iw7:B (2.6) BS01 MG 2.7.7.6 GO:0000428 ... Q9Z9H6 12000971
    7 1iw7:C (2.6) BS01 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    8 1iw7:C (2.6) BS02 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    9 1iw7:C (2.6) BS03 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    10 1iw7:C (2.6) BS04 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    11 1iw7:C (2.6) BS05 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    12 1iw7:C (2.6) BS06 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    13 1iw7:C (2.6) BS07 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    14 1iw7:C (2.6) BS08 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    15 1iw7:C (2.6) BS09 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    16 1iw7:C (2.6) BS10 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    17 1iw7:C (2.6) BS11 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    18 1iw7:C (2.6) BS12 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    19 1iw7:C (2.6) BS13 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    20 1iw7:C (2.6) BS14 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    21 1iw7:D (2.6) BS01 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    22 1iw7:D (2.6) BS02 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    23 1iw7:D (2.6) BS03 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    24 1iw7:D (2.6) BS04 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    25 1iw7:D (2.6) BS05 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    26 1iw7:D (2.6) BS06 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    27 1iw7:D (2.6) BS07 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    28 1iw7:D (2.6) BS08 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    29 1iw7:D (2.6) BS09 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    30 1iw7:D (2.6) BS10 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    31 1iw7:D (2.6) BS11 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    32 1iw7:D (2.6) BS12 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    33 1iw7:D (2.6) BS13 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    34 1iw7:D (2.6) BS14 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    35 1iw7:D (2.6) BS15 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    36 1iw7:D (2.6) BS16 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    37 1iw7:D (2.6) BS17 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    38 1iw7:D (2.6) BS18 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    39 1iw7:D (2.6) BS19 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    40 1iw7:D (2.6) BS20 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    41 1iw7:D (2.6) BS21 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    42 1iw7:D (2.6) BS22 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    43 1iw7:D (2.6) BS23 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    44 1iw7:D (2.6) BS24 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    45 1iw7:D (2.6) BS25 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    46 1iw7:D (2.6) BS26 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    47 1iw7:E (2.6) BS01 MG 2.7.7.6 GO:0000428 ... Q8RQE7 12000971
    48 1iw7:F (2.6) BS01 MG 2.7.7.6 GO:0003677 ... Q72L95 12000971
    49 1iw7:F (2.6) BS02 MG 2.7.7.6 GO:0003677 ... Q72L95 12000971
    50 1iw7:F (2.6) BS03 MG 2.7.7.6 GO:0003677 ... Q72L95 12000971
    51 1iw7:F (2.6) BS04 MG 2.7.7.6 GO:0003677 ... Q72L95 12000971
    52 1iw7:K (2.6) BS01 MG 2.7.7.6 GO:0000428 ... Q9Z9H6 12000971
    53 1iw7:K (2.6) BS02 MG 2.7.7.6 GO:0000428 ... Q9Z9H6 12000971
    54 1iw7:K (2.6) BS03 MG 2.7.7.6 GO:0000428 ... Q9Z9H6 12000971
    55 1iw7:L (2.6) BS01 MG 2.7.7.6 GO:0000428 ... Q9Z9H6 12000971
    56 1iw7:M (2.6) BS01 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    57 1iw7:M (2.6) BS02 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    58 1iw7:M (2.6) BS03 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    59 1iw7:M (2.6) BS04 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    60 1iw7:M (2.6) BS05 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    61 1iw7:M (2.6) BS06 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    62 1iw7:M (2.6) BS07 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    63 1iw7:M (2.6) BS08 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    64 1iw7:M (2.6) BS09 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    65 1iw7:M (2.6) BS10 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    66 1iw7:M (2.6) BS11 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    67 1iw7:M (2.6) BS12 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    68 1iw7:M (2.6) BS13 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    69 1iw7:M (2.6) BS14 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    70 1iw7:M (2.6) BS15 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    71 1iw7:M (2.6) BS16 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    72 1iw7:M (2.6) BS17 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    73 1iw7:M (2.6) BS18 MG 2.7.7.6 GO:0000428 ... Q8RQE9 12000971
    74 1iw7:N (2.6) BS01 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    75 1iw7:N (2.6) BS02 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    76 1iw7:N (2.6) BS03 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    77 1iw7:N (2.6) BS04 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    78 1iw7:N (2.6) BS05 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    79 1iw7:N (2.6) BS06 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    80 1iw7:N (2.6) BS07 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    81 1iw7:N (2.6) BS08 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    82 1iw7:N (2.6) BS09 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    83 1iw7:N (2.6) BS10 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    84 1iw7:N (2.6) BS11 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    85 1iw7:N (2.6) BS12 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    86 1iw7:N (2.6) BS13 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    87 1iw7:N (2.6) BS14 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    88 1iw7:N (2.6) BS15 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    89 1iw7:N (2.6) BS16 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    90 1iw7:N (2.6) BS17 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    91 1iw7:N (2.6) BS18 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    92 1iw7:N (2.6) BS19 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    93 1iw7:N (2.6) BS20 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    94 1iw7:N (2.6) BS21 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    95 1iw7:N (2.6) BS22 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    96 1iw7:N (2.6) BS23 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    97 1iw7:N (2.6) BS24 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    98 1iw7:N (2.6) BS25 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    99 1iw7:N (2.6) BS26 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    100 1iw7:N (2.6) BS27 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    101 1iw7:N (2.6) BS28 MG 2.7.7.6 GO:0000287 ... Q8RQE8 12000971
    102 1iw7:O (2.6) BS01 MG 2.7.7.6 GO:0000428 ... Q8RQE7 12000971
    103 1iw7:O (2.6) BS02 MG 2.7.7.6 GO:0000428 ... Q8RQE7 12000971
    104 1iw7:P (2.6) BS01 MG 2.7.7.6 GO:0003677 ... Q72L95 12000971
    105 1iw7:P (2.6) BS02 MG 2.7.7.6 GO:0003677 ... Q72L95 12000971
    106 1iw7:P (2.6) BS03 MG 2.7.7.6 GO:0003677 ... Q72L95 12000971
    107 1iw7:P (2.6) BS04 MG 2.7.7.6 GO:0003677 ... Q72L95 12000971
    108 1iw7:P (2.6) BS05 MG 2.7.7.6 GO:0003677 ... Q72L95 12000971
    109 1iw7:P (2.6) BS06 MG 2.7.7.6 GO:0003677 ... Q72L95 12000971
    110 1iw7:P (2.6) BS07 MG 2.7.7.6 GO:0003677 ... Q72L95 12000971
    111 1iw7:P (2.6) BS08 MG 2.7.7.6 GO:0003677 ... Q72L95 12000971
    112 1iw7:P (2.6) BS09 MG 2.7.7.6 GO:0003677 ... Q72L95 12000971

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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