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BioLiP
Download all results in tab-seperated text for 110 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 2a68:A (2.5) BS01 MG 2.7.7.6 GO:0000428 ... Q5SHR6 16096056
    2 2a68:A (2.5) BS02 MG 2.7.7.6 GO:0000428 ... Q5SHR6 16096056
    3 2a68:A (2.5) BS03 MG 2.7.7.6 GO:0000428 ... Q5SHR6 16096056
    4 2a68:A (2.5) BS04 MG 2.7.7.6 GO:0000428 ... Q5SHR6 16096056
    5 2a68:A (2.5) BS05 MG 2.7.7.6 GO:0000428 ... Q5SHR6 16096056
    6 2a68:B (2.5) BS01 MG 2.7.7.6 GO:0000428 ... Q5SHR6 16096056
    7 2a68:B (2.5) BS02 MG 2.7.7.6 GO:0000428 ... Q5SHR6 16096056
    8 2a68:B (2.5) BS03 MG 2.7.7.6 GO:0000428 ... Q5SHR6 16096056
    9 2a68:B (2.5) BS04 MG 2.7.7.6 GO:0000428 ... Q5SHR6 16096056
    10 2a68:B (2.5) BS05 MG 2.7.7.6 GO:0000428 ... Q5SHR6 16096056
    11 2a68:C (2.5) BS01 RBT 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    12 2a68:C (2.5) BS02 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    13 2a68:C (2.5) BS03 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    14 2a68:C (2.5) BS04 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    15 2a68:C (2.5) BS05 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    16 2a68:C (2.5) BS06 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    17 2a68:C (2.5) BS07 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    18 2a68:C (2.5) BS08 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    19 2a68:C (2.5) BS09 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    20 2a68:C (2.5) BS10 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    21 2a68:C (2.5) BS11 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    22 2a68:C (2.5) BS12 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    23 2a68:C (2.5) BS13 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    24 2a68:C (2.5) BS14 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    25 2a68:C (2.5) BS15 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    26 2a68:C (2.5) BS16 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    27 2a68:C (2.5) BS17 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    28 2a68:C (2.5) BS18 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    29 2a68:C (2.5) BS19 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    30 2a68:C (2.5) BS20 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    31 2a68:D (2.5) BS01 ZN 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    32 2a68:D (2.5) BS02 ZN 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    33 2a68:D (2.5) BS03 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    34 2a68:D (2.5) BS04 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    35 2a68:D (2.5) BS05 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    36 2a68:D (2.5) BS06 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    37 2a68:D (2.5) BS07 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    38 2a68:D (2.5) BS08 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    39 2a68:D (2.5) BS09 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    40 2a68:D (2.5) BS10 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    41 2a68:D (2.5) BS11 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    42 2a68:D (2.5) BS12 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    43 2a68:D (2.5) BS13 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    44 2a68:D (2.5) BS14 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    45 2a68:D (2.5) BS15 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    46 2a68:D (2.5) BS16 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    47 2a68:D (2.5) BS17 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    48 2a68:D (2.5) BS18 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    49 2a68:D (2.5) BS19 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    50 2a68:D (2.5) BS20 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    51 2a68:D (2.5) BS21 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    52 2a68:D (2.5) BS22 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    53 2a68:D (2.5) BS23 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    54 2a68:D (2.5) BS24 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    55 2a68:D (2.5) BS25 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    56 2a68:D (2.5) BS26 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    57 2a68:D (2.5) BS27 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    58 2a68:F (2.5) BS01 MG ? GO:0003677 ... Q5SKW1 16096056
    59 2a68:F (2.5) BS02 MG ? GO:0003677 ... Q5SKW1 16096056
    60 2a68:F (2.5) BS03 MG ? GO:0003677 ... Q5SKW1 16096056
    61 2a68:F (2.5) BS04 MG ? GO:0003677 ... Q5SKW1 16096056
    62 2a68:K (2.5) BS01 MG 2.7.7.6 GO:0000428 ... Q5SHR6 16096056
    63 2a68:K (2.5) BS02 MG 2.7.7.6 GO:0000428 ... Q5SHR6 16096056
    64 2a68:K (2.5) BS03 MG 2.7.7.6 GO:0000428 ... Q5SHR6 16096056
    65 2a68:K (2.5) BS04 MG 2.7.7.6 GO:0000428 ... Q5SHR6 16096056
    66 2a68:K (2.5) BS05 MG 2.7.7.6 GO:0000428 ... Q5SHR6 16096056
    67 2a68:L (2.5) BS01 MG 2.7.7.6 GO:0000428 ... Q5SHR6 16096056
    68 2a68:L (2.5) BS02 MG 2.7.7.6 GO:0000428 ... Q5SHR6 16096056
    69 2a68:M (2.5) BS01 RBT 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    70 2a68:M (2.5) BS02 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    71 2a68:M (2.5) BS03 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    72 2a68:M (2.5) BS04 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    73 2a68:M (2.5) BS05 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    74 2a68:M (2.5) BS06 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    75 2a68:M (2.5) BS07 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    76 2a68:M (2.5) BS08 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    77 2a68:M (2.5) BS09 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    78 2a68:M (2.5) BS10 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    79 2a68:M (2.5) BS11 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    80 2a68:M (2.5) BS12 MG 2.7.7.6 GO:0000428 ... Q8RQE9 16096056
    81 2a68:N (2.5) BS01 ZN 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    82 2a68:N (2.5) BS02 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    83 2a68:N (2.5) BS03 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    84 2a68:N (2.5) BS04 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    85 2a68:N (2.5) BS05 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    86 2a68:N (2.5) BS06 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    87 2a68:N (2.5) BS07 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    88 2a68:N (2.5) BS08 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    89 2a68:N (2.5) BS09 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    90 2a68:N (2.5) BS10 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    91 2a68:N (2.5) BS11 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    92 2a68:N (2.5) BS12 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    93 2a68:N (2.5) BS13 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    94 2a68:N (2.5) BS14 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    95 2a68:N (2.5) BS15 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    96 2a68:N (2.5) BS16 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    97 2a68:N (2.5) BS17 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    98 2a68:N (2.5) BS18 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    99 2a68:N (2.5) BS19 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    100 2a68:N (2.5) BS20 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    101 2a68:N (2.5) BS21 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    102 2a68:N (2.5) BS22 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    103 2a68:N (2.5) BS23 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    104 2a68:N (2.5) BS24 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    105 2a68:N (2.5) BS25 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    106 2a68:N (2.5) BS26 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16096056
    107 2a68:O (2.5) BS01 MG 2.7.7.6 GO:0000428 ... Q8RQE7 16096056
    108 2a68:P (2.5) BS01 RBT ? GO:0003677 ... Q5SKW1 16096056
    109 2a68:P (2.5) BS02 MG ? GO:0003677 ... Q5SKW1 16096056
    110 2a68:P (2.5) BS03 MG ? GO:0003677 ... Q5SKW1 16096056
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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