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BioLiP
Download all results in tab-seperated text for 136 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 2o01:1 (3.4) BS01 CLA ? GO:0009765 ... Q01667 17476261
    2 2o01:1 (3.4) BS02 CLA ? GO:0009765 ... Q01667 17476261
    3 2o01:1 (3.4) BS03 CLA ? GO:0009765 ... Q01667 17476261
    4 2o01:1 (3.4) BS04 CLA ? GO:0009765 ... Q01667 17476261
    5 2o01:1 (3.4) BS05 CLA ? GO:0009765 ... Q01667 17476261
    6 2o01:1 (3.4) BS06 CLA ? GO:0009765 ... Q01667 17476261
    7 2o01:2 (3.4) BS01 CLA ? GO:0009765 ... Q41038 17476261
    8 2o01:2 (3.4) BS02 CLA ? GO:0009765 ... Q41038 17476261
    9 2o01:2 (3.4) BS03 CLA ? GO:0009765 ... Q41038 17476261
    10 2o01:2 (3.4) BS04 CLA ? GO:0009765 ... Q41038 17476261
    11 2o01:2 (3.4) BS05 CLA ? GO:0009765 ... Q41038 17476261
    12 2o01:2 (3.4) BS06 CLA ? GO:0009765 ... Q41038 17476261
    13 2o01:3 (3.4) BS01 CLA ? GO:0009765 ... Q9SY97 17476261
    14 2o01:3 (3.4) BS02 CLA ? GO:0009765 ... Q9SY97 17476261
    15 2o01:3 (3.4) BS03 CLA ? GO:0009765 ... Q9SY97 17476261
    16 2o01:3 (3.4) BS04 CLA ? GO:0009765 ... Q9SY97 17476261
    17 2o01:3 (3.4) BS05 CLA ? GO:0009765 ... Q9SY97 17476261
    18 2o01:3 (3.4) BS06 CLA ? GO:0009765 ... Q9SY97 17476261
    19 2o01:4 (3.4) BS01 CLA ? GO:0009765 ... Q9SQL2 17476261
    20 2o01:4 (3.4) BS02 CLA ? GO:0009765 ... Q9SQL2 17476261
    21 2o01:4 (3.4) BS03 CLA ? GO:0009765 ... Q9SQL2 17476261
    22 2o01:4 (3.4) BS04 CLA ? GO:0009765 ... Q9SQL2 17476261
    23 2o01:4 (3.4) BS05 CLA ? GO:0009765 ... Q9SQL2 17476261
    24 2o01:4 (3.4) BS06 CLA ? GO:0009765 ... Q9SQL2 17476261
    25 2o01:4 (3.4) BS07 CLA ? GO:0009765 ... Q9SQL2 17476261
    26 2o01:A (3.4) BS01 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    27 2o01:A (3.4) BS02 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    28 2o01:A (3.4) BS03 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    29 2o01:A (3.4) BS04 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    30 2o01:A (3.4) BS05 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    31 2o01:A (3.4) BS06 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    32 2o01:A (3.4) BS07 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    33 2o01:A (3.4) BS08 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    34 2o01:A (3.4) BS09 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    35 2o01:A (3.4) BS10 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    36 2o01:A (3.4) BS11 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    37 2o01:A (3.4) BS12 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    38 2o01:A (3.4) BS13 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    39 2o01:A (3.4) BS14 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    40 2o01:A (3.4) BS15 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    41 2o01:A (3.4) BS16 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    42 2o01:A (3.4) BS17 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    43 2o01:A (3.4) BS18 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    44 2o01:A (3.4) BS19 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    45 2o01:A (3.4) BS20 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    46 2o01:A (3.4) BS21 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    47 2o01:A (3.4) BS22 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    48 2o01:A (3.4) BS23 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    49 2o01:A (3.4) BS24 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    50 2o01:A (3.4) BS25 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    51 2o01:A (3.4) BS26 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    52 2o01:A (3.4) BS27 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    53 2o01:A (3.4) BS28 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    54 2o01:A (3.4) BS29 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    55 2o01:A (3.4) BS30 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    56 2o01:A (3.4) BS31 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    57 2o01:A (3.4) BS32 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    58 2o01:A (3.4) BS33 PQN 1.97.1.12 GO:0000287 ... P05310 17476261
    59 2o01:A (3.4) BS34 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    60 2o01:A (3.4) BS35 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    61 2o01:A (3.4) BS36 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    62 2o01:A (3.4) BS37 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    63 2o01:A (3.4) BS38 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    64 2o01:A (3.4) BS39 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    65 2o01:A (3.4) BS40 SF4 1.97.1.12 GO:0000287 ... P05310 17476261
    66 2o01:A (3.4) BS41 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    67 2o01:B (3.4) BS01 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    68 2o01:B (3.4) BS02 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    69 2o01:B (3.4) BS03 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    70 2o01:B (3.4) BS04 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    71 2o01:B (3.4) BS05 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    72 2o01:B (3.4) BS06 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    73 2o01:B (3.4) BS07 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    74 2o01:B (3.4) BS08 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    75 2o01:B (3.4) BS09 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    76 2o01:B (3.4) BS10 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    77 2o01:B (3.4) BS11 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    78 2o01:B (3.4) BS12 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    79 2o01:B (3.4) BS13 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    80 2o01:B (3.4) BS14 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    81 2o01:B (3.4) BS15 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    82 2o01:B (3.4) BS16 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    83 2o01:B (3.4) BS17 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    84 2o01:B (3.4) BS18 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    85 2o01:B (3.4) BS19 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    86 2o01:B (3.4) BS20 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    87 2o01:B (3.4) BS21 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    88 2o01:B (3.4) BS22 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    89 2o01:B (3.4) BS23 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    90 2o01:B (3.4) BS24 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    91 2o01:B (3.4) BS25 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    92 2o01:B (3.4) BS26 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    93 2o01:B (3.4) BS27 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    94 2o01:B (3.4) BS28 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    95 2o01:B (3.4) BS29 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96 2o01:B (3.4) BS30 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    97 2o01:B (3.4) BS31 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    98 2o01:B (3.4) BS32 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    99 2o01:B (3.4) BS33 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    100 2o01:B (3.4) BS34 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    101 2o01:B (3.4) BS35 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    102 2o01:B (3.4) BS36 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    103 2o01:B (3.4) BS37 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    104 2o01:B (3.4) BS38 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    105 2o01:B (3.4) BS39 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    106 2o01:B (3.4) BS40 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    107 2o01:B (3.4) BS41 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    108 2o01:B (3.4) BS42 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    109 2o01:B (3.4) BS43 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    110 2o01:B (3.4) BS44 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    111 2o01:B (3.4) BS45 SF4 1.97.1.12 GO:0000287 ... P05311 17476261
    112 2o01:B (3.4) BS46 PQN 1.97.1.12 GO:0000287 ... P05311 17476261
    113 2o01:B (3.4) BS47 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    114 2o01:B (3.4) BS48 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    115 2o01:C (3.4) BS01 SF4 1.97.1.12 GO:0009055 ... P10793 17476261
    116 2o01:C (3.4) BS02 SF4 1.97.1.12 GO:0009055 ... P10793 17476261
    117 2o01:F (3.4) BS01 CLA ? GO:0009522 ... P12355 17476261
    118 2o01:F (3.4) BS02 CLA ? GO:0009522 ... P12355 17476261
    119 2o01:F (3.4) BS03 CLA ? GO:0009522 ... P12355 17476261
    120 2o01:F (3.4) BS04 CLA ? GO:0009522 ... P12355 17476261
    121 2o01:G (3.4) BS01 CLA ? GO:0009522 ... P12357 17476261
    122 2o01:G (3.4) BS02 CLA ? GO:0009522 ... P12357 17476261
    123 2o01:G (3.4) BS03 CLA ? GO:0009522 ... P12357 17476261
    124 2o01:H (3.4) BS01 CLA ? GO:0009522 ... P22179 17476261
    125 2o01:I (3.4) BS01 CLA ? GO:0009522 ... P17227 17476261
    126 2o01:I (3.4) BS02 CLA ? GO:0009522 ... P17227 17476261
    127 2o01:I (3.4) BS03 CLA ? GO:0009522 ... P17227 17476261
    128 2o01:J (3.4) BS01 CLA ? GO:0009507 ... P17230 17476261
    129 2o01:K (3.4) BS01 CLA N/A N/A N/A 17476261
    130 2o01:L (3.4) BS01 CLA ? GO:0009522 ... Q41385 17476261
    131 2o01:L (3.4) BS02 CLA ? GO:0009522 ... Q41385 17476261
    132 2o01:L (3.4) BS03 CLA ? GO:0009522 ... Q41385 17476261
    133 2o01:L (3.4) BS04 CLA ? GO:0009522 ... Q41385 17476261
    134 2o01:L (3.4) BS05 CLA ? GO:0009522 ... Q41385 17476261
    135 2o01:L (3.4) BS06 CLA ? GO:0009522 ... Q41385 17476261
    136 2o01:L (3.4) BS07 CLA ? GO:0009522 ... Q41385 17476261
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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