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BioLiP
Download all results in tab-seperated text for 109 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 3re7:A (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    2 3re7:A (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    3 3re7:A (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    4 3re7:A (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    5 3re7:B (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    6 3re7:B (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    7 3re7:B (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    8 3re7:B (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    9 3re7:C (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    10 3re7:C (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    11 3re7:C (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    12 3re7:C (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    13 3re7:C (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    14 3re7:C (2.82) BS06 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    15 3re7:D (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    16 3re7:D (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    17 3re7:D (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    18 3re7:D (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    19 3re7:D (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    20 3re7:E (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    21 3re7:E (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    22 3re7:E (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    23 3re7:E (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    24 3re7:F (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    25 3re7:F (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    26 3re7:F (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    27 3re7:G (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    28 3re7:G (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    29 3re7:G (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    30 3re7:G (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    31 3re7:G (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    32 3re7:H (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    33 3re7:H (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    34 3re7:H (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    35 3re7:H (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    36 3re7:I (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    37 3re7:I (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    38 3re7:I (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    39 3re7:I (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    40 3re7:I (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    41 3re7:J (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    42 3re7:J (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    43 3re7:J (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    44 3re7:J (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    45 3re7:K (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    46 3re7:K (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    47 3re7:K (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    48 3re7:L (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    49 3re7:L (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    50 3re7:L (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    51 3re7:L (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    52 3re7:L (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    53 3re7:M (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    54 3re7:M (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    55 3re7:M (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    56 3re7:M (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    57 3re7:M (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    58 3re7:N (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    59 3re7:N (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    60 3re7:N (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    61 3re7:N (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    62 3re7:N (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    63 3re7:O (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    64 3re7:O (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    65 3re7:O (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    66 3re7:O (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    67 3re7:O (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    68 3re7:P (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    69 3re7:P (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    70 3re7:P (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    71 3re7:P (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    72 3re7:Q (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    73 3re7:Q (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    74 3re7:Q (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    75 3re7:Q (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    76 3re7:Q (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    77 3re7:R (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    78 3re7:R (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    79 3re7:R (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    80 3re7:R (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    81 3re7:R (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    82 3re7:S (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    83 3re7:S (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    84 3re7:S (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    85 3re7:S (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    86 3re7:T (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    87 3re7:T (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    88 3re7:T (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    89 3re7:U (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    90 3re7:U (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    91 3re7:U (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    92 3re7:U (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    93 3re7:V (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    94 3re7:V (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    95 3re7:V (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    96 3re7:V (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    97 3re7:V (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    98 3re7:V (2.82) BS06 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    99 3re7:W (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    100 3re7:W (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    101 3re7:W (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    102 3re7:W (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    103 3re7:W (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    104 3re7:W (2.82) BS06 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    105 3re7:X (2.82) BS01 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    106 3re7:X (2.82) BS02 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    107 3re7:X (2.82) BS03 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    108 3re7:X (2.82) BS04 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    109 3re7:X (2.82) BS05 CU 1.16.3.1 GO:0004322 ... P07798 22424302
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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