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BioLiP
Download all results in tab-seperated text for 125 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4pj0:A (2.437) BS01 peptide 1.10.3.9 GO:0005506 ... P0A444 25438669
    2 4pj0:A (2.437) BS02 OEX 1.10.3.9 GO:0005506 ... P0A444 25438669
    3 4pj0:A (2.437) BS03 FE 1.10.3.9 GO:0005506 ... P0A444 25438669
    4 4pj0:A (2.437) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 25438669
    5 4pj0:A (2.437) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 25438669
    6 4pj0:A (2.437) BS06 CLA 1.10.3.9 GO:0005506 ... P0A444 25438669
    7 4pj0:A (2.437) BS07 BCT 1.10.3.9 GO:0005506 ... P0A444 25438669
    8 4pj0:A (2.437) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 25438669
    9 4pj0:A (2.437) BS09 PHO 1.10.3.9 GO:0005506 ... P0A444 25438669
    10 4pj0:A (2.437) BS10 PHO 1.10.3.9 GO:0005506 ... P0A444 25438669
    11 4pj0:A (2.437) BS11 CLA 1.10.3.9 GO:0005506 ... P0A444 25438669
    12 4pj0:B (2.437) BS01 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    13 4pj0:B (2.437) BS02 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    14 4pj0:B (2.437) BS03 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    15 4pj0:B (2.437) BS04 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    16 4pj0:B (2.437) BS05 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    17 4pj0:B (2.437) BS06 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    18 4pj0:B (2.437) BS07 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    19 4pj0:B (2.437) BS08 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    20 4pj0:B (2.437) BS09 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    21 4pj0:B (2.437) BS10 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    22 4pj0:B (2.437) BS11 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    23 4pj0:B (2.437) BS12 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    24 4pj0:B (2.437) BS13 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    25 4pj0:B (2.437) BS14 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    26 4pj0:B (2.437) BS15 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    27 4pj0:B (2.437) BS16 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    28 4pj0:C (2.437) BS01 OEX 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    29 4pj0:C (2.437) BS02 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    30 4pj0:C (2.437) BS03 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    31 4pj0:C (2.437) BS04 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    32 4pj0:C (2.437) BS05 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    33 4pj0:C (2.437) BS06 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    34 4pj0:C (2.437) BS07 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    35 4pj0:C (2.437) BS08 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    36 4pj0:C (2.437) BS09 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    37 4pj0:C (2.437) BS10 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    38 4pj0:C (2.437) BS11 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    39 4pj0:C (2.437) BS12 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    40 4pj0:C (2.437) BS13 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    41 4pj0:C (2.437) BS14 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    42 4pj0:D (2.437) BS01 FE 1.10.3.9 GO:0005506 ... Q8CM25 25438669
    43 4pj0:D (2.437) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 25438669
    44 4pj0:D (2.437) BS03 BCT 1.10.3.9 GO:0005506 ... Q8CM25 25438669
    45 4pj0:D (2.437) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 25438669
    46 4pj0:D (2.437) BS05 PHO 1.10.3.9 GO:0005506 ... Q8CM25 25438669
    47 4pj0:D (2.437) BS06 PHO 1.10.3.9 GO:0005506 ... Q8CM25 25438669
    48 4pj0:D (2.437) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 25438669
    49 4pj0:D (2.437) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 25438669
    50 4pj0:D (2.437) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 25438669
    51 4pj0:E (2.437) BS01 HEM 1.10.3.9 GO:0005506 ... Q8DIP0 25438669
    52 4pj0:F (2.437) BS01 HEM 1.10.3.9 GO:0005506 ... Q8DIN9 25438669
    53 4pj0:H (2.437) BS01 CLA 1.10.3.9 GO:0009523 ... Q8DJ43 25438669
    54 4pj0:H (2.437) BS02 CLA 1.10.3.9 GO:0009523 ... Q8DJ43 25438669
    55 4pj0:H (2.437) BS03 CLA 1.10.3.9 GO:0009523 ... Q8DJ43 25438669
    56 4pj0:H (2.437) BS04 CLA 1.10.3.9 GO:0009523 ... Q8DJ43 25438669
    57 4pj0:I (2.437) BS01 CLA 1.10.3.9 GO:0005737 ... Q8DJZ6 25438669
    58 4pj0:K (2.437) BS01 peptide 1.10.3.9 GO:0005737 ... Q9F1K9 25438669
    59 4pj0:K (2.437) BS02 CLA 1.10.3.9 GO:0005737 ... Q9F1K9 25438669
    60 4pj0:L (2.437) BS01 peptide 1.10.3.9 GO:0005737 ... Q8DIN8 25438669
    61 4pj0:V (2.437) BS01 HEC 1.10.3.9 GO:0005506 ... P0A386 25438669
    62 4pj0:Z (2.437) BS01 peptide 1.10.3.9 GO:0009523 ... Q8DHJ2 25438669
    63 4pj0:a (2.437) BS01 peptide 1.10.3.9 GO:0005506 ... P0A444 25438669
    64 4pj0:a (2.437) BS02 OEX 1.10.3.9 GO:0005506 ... P0A444 25438669
    65 4pj0:a (2.437) BS03 FE 1.10.3.9 GO:0005506 ... P0A444 25438669
    66 4pj0:a (2.437) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 25438669
    67 4pj0:a (2.437) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 25438669
    68 4pj0:a (2.437) BS06 CLA 1.10.3.9 GO:0005506 ... P0A444 25438669
    69 4pj0:a (2.437) BS07 PHO 1.10.3.9 GO:0005506 ... P0A444 25438669
    70 4pj0:a (2.437) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 25438669
    71 4pj0:a (2.437) BS09 BCT 1.10.3.9 GO:0005506 ... P0A444 25438669
    72 4pj0:a (2.437) BS10 CLA 1.10.3.9 GO:0005506 ... P0A444 25438669
    73 4pj0:a (2.437) BS11 PHO 1.10.3.9 GO:0005506 ... P0A444 25438669
    74 4pj0:b (2.437) BS01 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    75 4pj0:b (2.437) BS02 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    76 4pj0:b (2.437) BS03 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    77 4pj0:b (2.437) BS04 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    78 4pj0:b (2.437) BS05 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    79 4pj0:b (2.437) BS06 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    80 4pj0:b (2.437) BS07 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    81 4pj0:b (2.437) BS08 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    82 4pj0:b (2.437) BS09 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    83 4pj0:b (2.437) BS10 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    84 4pj0:b (2.437) BS11 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    85 4pj0:b (2.437) BS12 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    86 4pj0:b (2.437) BS13 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    87 4pj0:b (2.437) BS14 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    88 4pj0:b (2.437) BS15 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    89 4pj0:b (2.437) BS16 CLA 1.10.3.9 GO:0009521 ... Q8DIQ1 25438669
    90 4pj0:c (2.437) BS01 OEX 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    91 4pj0:c (2.437) BS02 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    92 4pj0:c (2.437) BS03 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    93 4pj0:c (2.437) BS04 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    94 4pj0:c (2.437) BS05 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    95 4pj0:c (2.437) BS06 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    96 4pj0:c (2.437) BS07 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    97 4pj0:c (2.437) BS08 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    98 4pj0:c (2.437) BS09 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    99 4pj0:c (2.437) BS10 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    100 4pj0:c (2.437) BS11 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    101 4pj0:c (2.437) BS12 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    102 4pj0:c (2.437) BS13 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    103 4pj0:c (2.437) BS14 CLA 1.10.3.9 GO:0005737 ... Q8DIF8 25438669
    104 4pj0:d (2.437) BS01 FE 1.10.3.9 GO:0005506 ... Q8CM25 25438669
    105 4pj0:d (2.437) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 25438669
    106 4pj0:d (2.437) BS03 CLA 1.10.3.9 GO:0005506 ... Q8CM25 25438669
    107 4pj0:d (2.437) BS04 PHO 1.10.3.9 GO:0005506 ... Q8CM25 25438669
    108 4pj0:d (2.437) BS05 BCT 1.10.3.9 GO:0005506 ... Q8CM25 25438669
    109 4pj0:d (2.437) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 25438669
    110 4pj0:d (2.437) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 25438669
    111 4pj0:d (2.437) BS08 PHO 1.10.3.9 GO:0005506 ... Q8CM25 25438669
    112 4pj0:d (2.437) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 25438669
    113 4pj0:e (2.437) BS01 HEM 1.10.3.9 GO:0005506 ... Q8DIP0 25438669
    114 4pj0:f (2.437) BS01 HEM 1.10.3.9 GO:0005506 ... Q8DIN9 25438669
    115 4pj0:h (2.437) BS01 CLA 1.10.3.9 GO:0009523 ... Q8DJ43 25438669
    116 4pj0:h (2.437) BS02 CLA 1.10.3.9 GO:0009523 ... Q8DJ43 25438669
    117 4pj0:h (2.437) BS03 CLA 1.10.3.9 GO:0009523 ... Q8DJ43 25438669
    118 4pj0:h (2.437) BS04 CLA 1.10.3.9 GO:0009523 ... Q8DJ43 25438669
    119 4pj0:i (2.437) BS01 CLA 1.10.3.9 GO:0005737 ... Q8DJZ6 25438669
    120 4pj0:k (2.437) BS01 peptide 1.10.3.9 GO:0005737 ... Q9F1K9 25438669
    121 4pj0:k (2.437) BS02 CLA 1.10.3.9 GO:0005737 ... Q9F1K9 25438669
    122 4pj0:k (2.437) BS03 CLA 1.10.3.9 GO:0005737 ... Q9F1K9 25438669
    123 4pj0:l (2.437) BS01 peptide 1.10.3.9 GO:0005737 ... Q8DIN8 25438669
    124 4pj0:v (2.437) BS01 HEC 1.10.3.9 GO:0005506 ... P0A386 25438669
    125 4pj0:z (2.437) BS01 peptide 1.10.3.9 GO:0009523 ... Q8DHJ2 25438669
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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