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BioLiP

PDB CCD ID: I2C
Number of entries in BioLiP: 3
Chemical formula: C19 H23 N6 O10 P
InChI: InChI=1S/C19H23N6O10P/c1-7-9(3-4-26)22-16(29)8(2)14(7)35-36(31,32)33-5-10-12(27)13(28)18(34-10)25-6-21-11-15(25)23-19(20)24-17(11)30/h4,6,10,12-13,18,27-28H,3,5H2,1-2H3,(H,22,29)(H,31,32)(H3,20,23,24,30)/t10-,12-,13-,18-/m1/s1
InChIKey: FVDPDULUWMBTHF-IPKTUIKJSA-N
SMILES:
SoftwareSMILES
CACTVS 3.341Cc1c(O)nc(CC=O)c(C)c1O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)n3cnc4C(=O)NC(=Nc34)N
CACTVS 3.341Cc1c(O)nc(CC=O)c(C)c1O[P@](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n3cnc4C(=O)NC(=Nc34)N
OpenEye OEToolkits 1.5.0Cc1c(nc(c(c1OP(=O)(O)OCC2C(C(C(O2)n3cnc4c3N=C(NC4=O)N)O)O)C)O)CC=O
OpenEye OEToolkits 1.5.0Cc1c(nc(c(c1O[P@@](=O)(O)OC[C@@H]2[C@H]([C@H]([C@@H](O2)n3cnc4c3N=C(NC4=O)N)O)O)C)O)CC=O
ACDLabs 10.04O=CCc4nc(O)c(c(OP(=O)(O)OCC3OC(n2cnc1c2N=C(N)NC1=O)C(O)C3O)c4C)C
Name:5'-O-[(S)-hydroxy{[2-hydroxy-3,5-dimethyl-6-(2-oxoethyl)pyridin-4-yl]oxy}phosphoryl]guanosine
ZINC: ZINC000058660800
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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