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BioLiP

PDB CCD ID: RUU
Number of entries in BioLiP: 14
Chemical formula: C5 H10 O5
InChI: InChI=1S/C5H10O5/c6-2-5(9)4(8)3(7)1-10-5/h3-4,6-9H,1-2H2/t3-,4-,5+/m0/s1
InChIKey: LQXVFWRQNMEDEE-VAYJURFESA-N
SMILES:
SoftwareSMILES
CACTVS 3.385OC[C@@]1(O)OC[C@H](O)[C@@H]1O
ACDLabs 12.01OCC1(O)OCC(O)C1O
OpenEye OEToolkits 1.7.6C1C(C(C(O1)(CO)O)O)O
CACTVS 3.385OC[C]1(O)OC[CH](O)[CH]1O
OpenEye OEToolkits 1.7.6C1[C@@H]([C@@H]([C@](O1)(CO)O)O)O
Name:alpha-L-ribulofuranose;
alpha-L-ribulose;
L-ribulose;
ribulose
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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