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BioLiP

PDB CCD ID: XYF
Number of entries in BioLiP: 4
Chemical formula: C5 H8 F O5
InChI: InChI=1S/C5H8FO5/c6-4-2(8)1(7)3(9)5(10)11-4/h1-5,7-9H/q-1/t1-,2-,3+,4-,5?/m0/s1
InChIKey: CSWSGZBYLQUXQI-ZAMRNKCBSA-N
SMILES:
SoftwareSMILES
OpenEye OEToolkits 1.5.0[C@H]1([C@H]([C@@H](O[C@@H]([C@H]1O)F)[O-])O)O
ACDLabs 10.04[O-]C1OC(F)C(O)C(O)C1O
CACTVS 3.341O[C@H]1[C@H]([O-])O[C@H](F)[C@@H](O)[C@@H]1O
OpenEye OEToolkits 1.5.0C1(C(C(OC(C1O)F)[O-])O)O
CACTVS 3.341O[CH]1[CH]([O-])O[CH](F)[CH](O)[CH]1O
Name:5(R)-fluoro-beta-D-xylopyranose;
5(R)-fluoro-beta-D-xylose;
5(R)-fluoro-D-xylose;
5(R)-fluoro-xylose
DrugBank: DB03586
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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